C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L34
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062601 Rpl34-001 ENSMUSG00000062006 10090 - 3:130726831-130730337 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLiverMusclePlacentaTestisENSMUST00000062601
Transcript ID Adrenal Brain Liver Muscle Placenta Testis
ENSMUST00000062601 47.235±6.00 11.342±0.00 20.286±1.40 20.493±0.02 24.441±0.00 5.334±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PU CIL_0008PU_0002 VISTA 3:130139552-130741737
CIL_000872 CIL_000872_0002 VISTA 3:130437080-131038563
CIL_0008T5 CIL_0008T5_0002 VISTA 3:130661754-131264427

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394665 RPL34-002 protein_coding Homo_sapiens 0 510
ENST00000394667 RPL34-001 protein_coding Homo_sapiens 0 510
ENST00000394668 RPL34-003 protein_coding Homo_sapiens 0 510
ENST00000407959 RP1-182O16.1-001 processed_pseudogene Homo_sapiens 0 387
ENST00000434718 RP11-569G9.7-001 processed_pseudogene Homo_sapiens 0 327
ENST00000445636 RPL34P26-001 processed_pseudogene Homo_sapiens 0 372
ENST00000456162 RP11-58A11.2-001 processed_pseudogene Homo_sapiens 0 272
ENST00000473394 RP11-268I9.1-001 processed_pseudogene Homo_sapiens 0 228
ENST00000486062 RPL34P33-001 processed_pseudogene Homo_sapiens 0 355
ENST00000502534 RPL34-006 protein_coding Homo_sapiens 0 510
ENST00000506397 RPL34-005 protein_coding Homo_sapiens 0 508

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