C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008T5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1545 VISTA 9606 4:108033184-108635877
GeneTranscriptPositionBiotype
ENSG00000138795 (LEF1)
lymphoid enhancer-binding factor 1 		ENST00000265165 (LEF1-001) 108047545-108168422 protein_coding
ENST00000379951 (LEF1-201) 108047545-108168956 protein_coding
ENST00000438313 (LEF1-020) 108048417-108167798 protein_coding
ENST00000503879 (LEF1-017) 108047573-108078352 processed_transcript
ENST00000504426 (LEF1-013) 108047592-108071778 processed_transcript
ENST00000504775 (LEF1-008) 108070662-108167594 processed_transcript
ENST00000504950 (LEF1-007) 108078325-108166286 nonsense_mediated_decay
ENST00000505293 (LEF1-002) 108083368-108166796 processed_transcript
ENST00000505297 (LEF1-011) 108048354-108072896 processed_transcript
ENST00000505328 (LEF1-015) 108070430-108078405 retained_intron
ENST00000505379 (LEF1-010) 108048169-108083413 processed_transcript
ENST00000506680 (LEF1-019) 108063629-108167767 nonsense_mediated_decay
ENST00000507470 (LEF1-016) 108048527-108070895 retained_intron
ENST00000509428 (LEF1-009) 108048597-108165195 processed_transcript
ENST00000510135 (LEF1-005) 108048377-108165255 processed_transcript
ENST00000510624 (LEF1-018) 108048639-108166721 protein_coding
ENST00000510717 (LEF1-004) 108081621-108165257 processed_transcript
ENST00000512172 (LEF1-006) 108083213-108166301 protein_coding
ENST00000512407 (LEF1-014) 108048635-108072251 processed_transcript
ENST00000514444 (LEF1-012) 108048300-108078382 processed_transcript
ENST00000515500 (LEF1-003) 108081584-108166797 protein_coding
ENSG00000138796 (HADH)
hydroxyacyl-CoA dehydrogenase 		ENST00000309522 (HADH-001) 107989784-108035175 protein_coding
ENST00000403312 (HADH-002) 107989714-108035175 protein_coding
ENST00000505878 (HADH-003) 107989902-108035171 protein_coding
ENST00000507260 (HADH-009) 108014470-108027934 retained_intron
ENST00000510728 (HADH-006) 108027512-108034492 processed_transcript
ENST00000511742 (HADH-004) 107989855-108005334 nonsense_mediated_decay
ENST00000514776 (HADH-007) 108033000-108034492 retained_intron
ENST00000515462 (HADH-008) 108027715-108034492 retained_intron
ENST00000603302 (HADH-201) 107989714-108035174 protein_coding
ENSG00000232021 (LEF1-AS1)
LEF1 antisense RNA 1 		ENST00000436413 (LEF1-AS1-001) 108167525-108176426 antisense
ENST00000506314 (LEF1-AS1-003) 108172709-108176428 retained_intron
ENST00000507799 (LEF1-AS1-005) 108172699-108199920 antisense
ENST00000508266 (LEF1-AS1-004) 108171771-108173768 antisense
ENST00000508286 (LEF1-AS1-007) 108173419-108176430 antisense
ENST00000512129 (LEF1-AS1-006) 108176288-108256836 antisense
ENST00000512637 (LEF1-AS1-002) 108172120-108176426 antisense
ENSG00000234492 (RPL34-AS1)
RPL34 antisense RNA 1 (head to head) 		ENST00000506795 (RPL34-AS1-002) 108540168-108620429 lincRNA
ENST00000507248 (RPL34-AS1-001) 108538190-108620397 lincRNA
ENST00000509984 (RPL34-AS1-003) 108556101-108620395 lincRNA
ENST00000510212 (RPL34-AS1-004) 108590363-108620460 lincRNA
ENSG00000239939 (RPSAP34)
ribosomal protein SA pseudogene 34 		ENST00000476193 (RPSAP34-001) 108407843-108408578 processed_pseudogene
CIL_0008T5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1545 VISTA 10090 3:130661754-131264427
GeneTranscriptPositionBiotype
ENSMUSG00000027984 (Hadh)
hydroxyacyl-Coenzyme A dehydrogenase 		ENSMUST00000029610 (Hadh-001) 131233419-131272101 protein_coding
ENSMUST00000152427 (Hadh-002) 131245101-131272024 retained_intron
ENSMUSG00000027985 (Lef1)
lymphoid enhancer binding factor 1 		ENSMUST00000029611 (Lef1-001) 131110471-131224356 protein_coding
ENSMUST00000066849 (Lef1-006) 131110471-131224356 protein_coding
ENSMUST00000098611 (Lef1-002) 131112797-131224356 protein_coding
ENSMUST00000106341 (Lef1-004) 131110471-131224356 protein_coding
ENSMUST00000132737 (Lef1-005) 131112806-131188082 retained_intron
ENSMUST00000136147 (Lef1-003) 131112797-131117387 retained_intron
ENSMUSG00000041084 (Ostc)
oligosaccharyltransferase complex subunit 		ENSMUST00000043937 (Ostc-201) 130695921-130709444 protein_coding
ENSMUSG00000062006 (Rpl34)
ribosomal protein L34 		ENSMUST00000062601 (Rpl34-001) 130726831-130730337 protein_coding
ENSMUST00000079085 (Rpl34-002) 130726839-130730398 protein_coding
ENSMUST00000133802 (Rpl34-003) 130728332-130730334 retained_intron
ENSMUST00000135691 (Rpl34-004) 130726864-130730342 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008T5_0001ENSG00000138795ENST00000265165ENST00000379951ENST00000438313ENST00000503879ENST00000504426ENST00000504775ENST00000504950ENST00000505293ENST00000505297ENST00000505328ENST00000505379ENST00000506680ENST00000507470ENST00000509428ENST00000510135ENST00000510624ENST00000510717ENST00000512172ENST00000512407ENST00000514444ENST00000515500ENSG00000138796ENST00000309522ENST00000403312ENST00000505878ENST00000507260ENST00000510728ENST00000511742ENST00000514776ENST00000515462ENST00000603302ENSG00000232021ENST00000436413ENST00000506314ENST00000507799ENST00000508266ENST00000508286ENST00000512129ENST00000512637ENSG00000234492ENST00000506795ENST00000507248ENST00000509984ENST00000510212ENSG00000239939ENST00000476193CIL_0008T5_0002ENSMUSG00000027984ENSMUST00000029610ENSMUST00000152427ENSMUSG00000027985ENSMUST00000029611ENSMUST00000066849ENSMUST00000098611ENSMUST00000106341ENSMUST00000132737ENSMUST00000136147ENSMUSG00000041084ENSMUST00000043937ENSMUSG00000062006ENSMUST00000062601ENSMUST00000079085ENSMUST00000133802ENSMUST00000135691
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008T5_0001ENSG00000138795ENST00000265165ENST00000379951ENST00000438313ENST00000503879ENST00000504426ENST00000504775ENST00000505293ENST00000505297ENST00000505379ENST00000507470ENST00000510135ENST00000514444ENST00000515500ENSG00000138796ENST00000309522ENST00000505878ENST00000507260ENSG00000232021ENST00000436413ENST00000506314ENSG00000234492ENST00000506795ENST00000507248ENST00000509984ENST00000510212ENSG00000239939ENST00000476193CIL_0008T5_0002ENSMUSG00000027984ENSMUST00000029610ENSMUSG00000027985ENSMUST00000029611ENSMUST00000066849ENSMUST00000098611ENSMUST00000106341ENSMUST00000132737ENSMUSG00000041084ENSMUST00000043937ENSMUSG00000062006ENSMUST00000062601ENSMUST00000079085
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138795 ENST00000265165 N/A N/A N/A N/A 2.000±0.00 N/A 0.025±0.00 0.246±0.00 0.384±0.00 N/A N/A 0.817±0.15 1.055±0.50 N/A
ENST00000379951 0.232±0.00 2.314±0.00 0.134±0.00 0.513±0.00 N/A 0.254±0.01 N/A 0.468±0.00 N/A 1.161±0.36 N/A 0.817±0.48 0.796±0.00 14.285±0.00
ENST00000438313 N/A N/A N/A 1.268±0.00 N/A 0.698±0.00 N/A N/A N/A 1.991±0.00 N/A 1.040±0.00 2.212±0.00 N/A
ENST00000503879 N/A N/A N/A N/A 2.193±0.00 0.548±0.00 N/A 0.995±0.00 N/A N/A N/A N/A N/A N/A
ENST00000504426 N/A 3.816±0.00 0.442±0.00 N/A N/A N/A 0.084±0.00 N/A 0.019±0.00 1.160±0.27 N/A N/A N/A N/A
ENST00000504775 N/A N/A N/A N/A N/A N/A 0.205±0.00 N/A N/A N/A N/A 1.512±0.00 N/A N/A
ENST00000504950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505293 N/A N/A N/A 2.551±0.00 N/A N/A 0.143±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000505297 N/A N/A N/A N/A N/A 0.568±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505379 N/A N/A N/A 0.952±0.00 N/A 0.396±0.00 N/A N/A 0.576±0.00 N/A N/A 2.271±0.00 1.373±0.00 N/A
ENST00000506680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507470 N/A N/A N/A N/A N/A 0.924±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.788±0.00 N/A
ENST00000510624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.418±0.00 N/A N/A N/A
ENST00000515500 N/A N/A N/A N/A N/A N/A N/A N/A 0.977±0.00 N/A N/A 1.045±0.00 N/A N/A
ENSG00000138796 ENST00000309522 31.771±0.00 10.639±0.00 5.122±0.00 5.882±3.83 29.360±24.12 21.515±4.73 42.107±32.10 25.277±6.73 22.822±19.18 7.614±4.79 22.982±9.95 21.855±10.86 17.754±8.85 36.761±13.84
ENST00000403312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505878 N/A N/A 1.085±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507260 N/A N/A 3.434±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000232021 ENST00000436413 N/A N/A N/A 0.691±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.328±0.00
ENST00000506314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.003±0.00 N/A N/A N/A
ENST00000507799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234492 ENST00000506795 0.059±0.00 0.174±0.00 0.115±0.00 0.171±0.00 0.104±0.00 0.010±0.00 0.023±0.00 N/A 0.034±0.00 N/A N/A 0.059±0.00 N/A 0.243±0.00
ENST00000507248 0.028±0.00 0.074±0.00 0.055±0.00 N/A 0.025±0.00 0.002±0.00 0.045±0.02 0.120±0.00 0.019±0.01 0.034±0.00 N/A 0.006±0.00 N/A N/A
ENST00000509984 N/A N/A N/A N/A 0.030±0.00 0.038±0.00 N/A 0.251±0.00 0.054±0.04 0.079±0.00 0.637±0.00 0.060±0.01 0.037±0.00 N/A
ENST00000510212 N/A 0.253±0.00 0.238±0.00 0.040±0.00 N/A N/A 0.102±0.00 0.253±0.00 0.054±0.00 0.169±0.00 N/A 0.376±0.27 0.119±0.00 0.573±0.08
ENSG00000239939 ENST00000476193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.039±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027984 ENSMUST00000029610 165.438±50.47 190.683±61.09 51.721±4.20 9.702±2.81 137.066±45.15 125.644±34.29 308.183±20.41 266.211±10.16 178.801±83.42 60.211±8.76 77.526±11.03 74.494±17.71 79.084±25.52 16.010±7.08
ENSMUST00000152427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027985 ENSMUST00000029611 1.475±1.66 N/A 0.938±0.18 N/A 4.277±2.46 0.545±0.17 0.059±0.02 0.395±0.25 0.206±0.27 1.090±0.37 0.141±0.09 0.433±0.20 0.169±0.10 N/A
ENSMUST00000066849 0.731±0.00 N/A N/A 4.187±0.36 N/A N/A N/A 0.072±0.00 0.052±0.00 N/A 0.098±0.00 0.202±0.04 0.059±0.04 N/A
ENSMUST00000098611 1.391±1.31 4.032±1.60 0.353±0.11 0.308±0.00 15.587±7.72 0.270±0.05 0.354±0.21 1.014±0.68 0.277±0.32 2.468±0.69 0.221±0.24 0.721±0.60 0.077±0.04 9.744±3.80
ENSMUST00000106341 N/A N/A N/A 5.716±0.67 N/A N/A N/A 0.117±0.00 0.038±0.00 N/A 0.042±0.01 0.281±0.12 0.018±0.00 3.072±0.06
ENSMUST00000132737 0.019±0.00 N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A N/A 0.012±0.00 N/A
ENSMUST00000136147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000041084 ENSMUST00000043937 34.845±9.43 20.406±1.95 43.905±5.85 36.361±20.30 26.848±2.96 44.302±3.01 19.686±1.56 22.543±1.12 74.300±38.54 30.866±1.31 13.066±1.58 53.159±10.04 107.567±66.59 13.811±5.20
ENSMUSG00000062006 ENSMUST00000062601 N/A 47.235±6.00 N/A 11.342±0.00 N/A N/A N/A N/A 20.286±1.40 N/A 20.493±0.02 N/A 24.441±0.00 5.334±0.00
ENSMUST00000079085 888.705±319.13 144.096±15.76 1021.920±21.04 364.948±313.99 634.346±85.39 697.426±38.64 301.380±57.17 612.515±32.65 696.863±515.91 553.883±33.57 231.381±25.16 948.174±196.81 636.341±409.73 411.882±181.13
ENSMUST00000133802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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