C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphoglycerate kinase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062070 Pgk1 10090 + X:106187100-106203699 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000081593 Pgk1-001 106187100-106203699 protein_coding
  ENSMUST00000133559 Pgk1-002 106191628-106194776 retained_intron
  ENSMUST00000135949 Pgk1-003 106187163-106203661 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081593ENSMUST00000133559ENSMUST00000135949
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081593 48.620±0.65 25.521±2.38 65.764±6.20 77.863±8.26 54.464±39.97 32.204±8.77 102.797±3.74 143.005±19.58 111.620±51.93 25.486±4.93 304.468±32.01 25.299±16.72 104.147±72.34 4.262±1.26
ENSMUST00000133559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.243±0.00 N/A N/A
ENSMUST00000135949 N/A 7.250±2.12 N/A N/A 14.569±2.97 15.353±6.78 N/A 41.008±0.00 20.421±4.91 3.490±0.18 N/A 20.661±4.39 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YZ CIL_0001YZ_0002 CGP X:106187100-106221158

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004618 ISS phosphoglycerate kinase activity
GO:0005524 ISS ATP binding
GO:0005737 IEA cytoplasm
GO:0006096 IEA glycolytic process
GO:0016310 ISS phosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054191 pgk1 phosphoglycerate kinase 1 protein_coding Danio_rerio
ENSG00000102144 PGK1 phosphoglycerate kinase 1 protein_coding Homo_sapiens

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