C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoglycerate kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000081593 Pgk1-001 ENSMUSG00000062070 10090 + X:106187100-106203699 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081593
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081593 48.620±0.65 25.521±2.38 65.764±6.20 77.863±8.26 54.464±39.97 32.204±8.77 102.797±3.74 143.005±19.58 111.620±51.93 25.486±4.93 304.468±32.01 25.299±16.72 104.147±72.34 4.262±1.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YZ CIL_0001YZ_0002 CGP X:106187100-106221158

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004618 ISS phosphoglycerate kinase activity
GO:0005524 ISS ATP binding
GO:0005737 IEA cytoplasm
GO:0006096 IEA glycolytic process
GO:0016310 ISS phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304801 PGK2-001 protein_coding Homo_sapiens 0 1212
ENST00000373316 PGK1-001 protein_coding Homo_sapiens 0 2015
ENST00000426382 RP11-516A11.1-001 processed_pseudogene Homo_sapiens 0 1568
ENST00000431702 PGK1P2-001 processed_pseudogene Homo_sapiens 0 1341
ENST00000474281 PGK1-002 processed_transcript Homo_sapiens 0 231
ENST00000476531 PGK1-005 processed_transcript Homo_sapiens 0 401
ENST00000477335 PGK1-003 processed_transcript Homo_sapiens 0 230
ENST00000491291 PGK1-004 processed_transcript Homo_sapiens 0 941

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