C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoglycerate kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135949 Pgk1-003 ENSMUSG00000062070 10090 + X:106187163-106203661 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryENSMUST00000135949
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary
ENSMUST00000135949 7.250±2.12 14.569±2.97 15.353±6.78 41.008±0.00 20.421±4.91 3.490±0.18 20.661±4.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YZ CIL_0001YZ_0002 CGP X:106187100-106221158

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004618 IEA phosphoglycerate kinase activity
GO:0006096 IEA glycolytic process
GO:0016310 IEA phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304801 PGK2-001 protein_coding Homo_sapiens 0 760
ENST00000373316 PGK1-001 protein_coding Homo_sapiens 0 1107
ENST00000426382 RP11-516A11.1-001 processed_pseudogene Homo_sapiens 0 907
ENST00000431702 PGK1P2-001 processed_pseudogene Homo_sapiens 0 935
ENST00000474281 PGK1-002 processed_transcript Homo_sapiens 0 335
ENST00000476531 PGK1-005 processed_transcript Homo_sapiens 0 392
ENST00000477335 PGK1-003 processed_transcript Homo_sapiens 0 230
ENST00000491291 PGK1-004 processed_transcript Homo_sapiens 0 941

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