C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cornichon homolog 4 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062169 Cnih4 10090 + 1:181150931-181168994 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000075968 Cnih4-002 181154738-181166381 processed_transcript
  ENSMUST00000111057 Cnih4-003 181155720-181166349 retained_intron
  ENSMUST00000111059 Cnih4-004 181150931-181168994 protein_coding
  ENSMUST00000134115 Cnih4-001 181150931-181168994 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075968ENSMUST00000111057ENSMUST00000111059ENSMUST00000134115
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.004±0.00 11.904±4.02 N/A
ENSMUST00000111057 N/A N/A N/A N/A 7.824±0.00 N/A N/A N/A 3.961±1.17 N/A 9.157±0.93 15.772±0.43 21.786±10.26 3.408±0.00
ENSMUST00000111059 N/A N/A N/A 4.517±0.00 N/A N/A N/A N/A N/A N/A N/A 4.570±0.00 4.257±0.63 0.433±0.00
ENSMUST00000134115 8.925±1.96 7.669±0.50 9.145±0.31 5.648±2.38 7.378±0.93 10.690±1.39 9.492±0.51 10.248±1.87 4.473±1.71 8.866±0.98 7.320±0.51 11.995±3.15 7.453±3.28 2.630±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IP CIL_0008IP_0002 VISTA 1:180955937-181559663
CIL_0005S3 CIL_0005S3_0002 CGP 1:181093423-181168994
CIL_0000C0 CIL_0000C0_0003 CGP 1:181150931-181211552

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087759 cnih4 cornichon homolog 4 (Drosophila) protein_coding Danio_rerio
ENSG00000143771 CNIH4 cornichon family AMPA receptor auxiliary protein 4 protein_coding Homo_sapiens

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