C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000C0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000087759-ENSDARG00000062310 CGP 7955 16:3073399-3109880
GeneTranscriptPositionBiotype
ENSDARG00000062310 (CABZ01044136.1)
Uncharacterized protein 		ENSDART00000089944 (CABZ01044136.1-201) 3085833-3109880 protein_coding
ENSDARG00000087759 (cnih4)
cornichon homolog 4 (Drosophila) 		ENSDART00000126759 (cnih4-201) 3073399-3081132 protein_coding
CIL_0000C0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000143771-ENSG00000162923 CGP 9606 1:224356850-224437033
GeneTranscriptPositionBiotype
ENSG00000143771 (CNIH4)
cornichon family AMPA receptor auxiliary protein 4 		ENST00000366856 (CNIH4-005) 224356893-224379452 protein_coding
ENST00000366857 (CNIH4-002) 224356871-224379452 protein_coding
ENST00000366858 (CNIH4-004) 224356858-224379452 protein_coding
ENST00000366860 (CNIH4-006) 224356887-224375998 processed_transcript
ENST00000465271 (CNIH4-001) 224356850-224379452 protein_coding
ENST00000468318 (CNIH4-003) 224356888-224376884 processed_transcript
ENST00000469200 (CNIH4-008) 224377051-224379459 processed_transcript
ENST00000477413 (CNIH4-007) 224356921-224371297 processed_transcript
ENSG00000143786 (CNIH3)
cornichon family AMPA receptor auxiliary protein 3 		ENST00000272133 (CNIH3-001) 224616293-224740549 protein_coding
ENST00000470602 (CNIH3-009) 224515862-224536981 processed_transcript
ENST00000470788 (CNIH3-014) 224529222-224537582 processed_transcript
ENST00000471578 (CNIH3-007) 224434660-224588616 processed_transcript
ENST00000478120 (CNIH3-003) 224529196-224739337 processed_transcript
ENST00000479227 (CNIH3-013) 224587140-224588604 processed_transcript
ENST00000481095 (CNIH3-004) 224529218-224734706 processed_transcript
ENST00000483512 (CNIH3-011) 224434912-224521555 processed_transcript
ENST00000489556 (CNIH3-005) 224529223-224588492 processed_transcript
ENST00000492470 (CNIH3-010) 224565365-224588555 processed_transcript
ENST00000496277 (CNIH3-006) 224529310-224681026 processed_transcript
ENST00000496372 (CNIH3-012) 224513688-224521221 processed_transcript
ENST00000498126 (CNIH3-008) 224434925-224521222 processed_transcript
ENST00000498382 (CNIH3-002) 224529191-224739621 processed_transcript
ENSG00000162923 (WDR26)
WD repeat domain 26 		ENST00000414423 (WDR26-001) 224385143-224434299 protein_coding
ENST00000443112 (WDR26-010) 224412909-224434013 retained_intron
ENST00000445239 (WDR26-003) 224419562-224437033 protein_coding
ENST00000477425 (WDR26-005) 224419549-224433838 processed_transcript
ENST00000479727 (WDR26-008) 224397727-224401019 processed_transcript
ENST00000479778 (WDR26-009) 224429297-224433850 retained_intron
ENST00000480676 (WDR26-007) 224385666-224411484 protein_coding
ENST00000486652 (WDR26-002) 224389136-224434081 nonsense_mediated_decay
ENST00000489825 (WDR26-006) 224419445-224433856 retained_intron
ENSG00000266618 (MIR4742)
microRNA 4742 		ENST00000581069 (MIR4742-201) 224398227-224398311 miRNA
CIL_0000C0_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062169-ENSMUSG00000038733 CGP 10090 1:181150931-181211552
GeneTranscriptPositionBiotype
ENSMUSG00000038733 (Wdr26)
WD repeat domain 26 		ENSMUST00000036329 (Wdr26-003) 181177097-181211426 nonsense_mediated_decay
ENSMUST00000159290 (Wdr26-008) 181180407-181183739 protein_coding
ENSMUST00000159625 (Wdr26-005) 181187421-181192245 retained_intron
ENSMUST00000159673 (Wdr26-007) 181177675-181184266 nonsense_mediated_decay
ENSMUST00000159698 (Wdr26-006) 181182307-181184396 processed_transcript
ENSMUST00000161531 (Wdr26-004) 181198742-181203251 retained_intron
ENSMUST00000162819 (Wdr26-001) 181173228-181211552 protein_coding
ENSMUST00000162963 (Wdr26-002) 181173232-181211437 protein_coding
ENSMUSG00000062169 (Cnih4)
cornichon homolog 4 (Drosophila) 		ENSMUST00000075968 (Cnih4-002) 181154738-181166381 processed_transcript
ENSMUST00000111057 (Cnih4-003) 181155720-181166349 retained_intron
ENSMUST00000111059 (Cnih4-004) 181150931-181168994 protein_coding
ENSMUST00000134115 (Cnih4-001) 181150931-181168994 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000C0_0001ENSDARG00000062310ENSDART00000089944ENSDARG00000087759ENSDART00000126759CIL_0000C0_0002ENSG00000143771ENST00000366856ENST00000366857ENST00000366858ENST00000366860ENST00000465271ENST00000468318ENST00000469200ENST00000477413ENSG00000143786ENST00000272133ENST00000470602ENST00000470788ENST00000471578ENST00000478120ENST00000479227ENST00000481095ENST00000483512ENST00000489556ENST00000492470ENST00000496277ENST00000496372ENST00000498126ENST00000498382ENSG00000162923ENST00000414423ENST00000443112ENST00000445239ENST00000477425ENST00000479727ENST00000479778ENST00000480676ENST00000486652ENST00000489825ENSG00000266618ENST00000581069CIL_0000C0_0003ENSMUSG00000038733ENSMUST00000036329ENSMUST00000159290ENSMUST00000159625ENSMUST00000159673ENSMUST00000159698ENSMUST00000161531ENSMUST00000162819ENSMUST00000162963ENSMUSG00000062169ENSMUST00000075968ENSMUST00000111057ENSMUST00000111059ENSMUST00000134115
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000C0_0001ENSDARG00000062310ENSDART00000089944ENSDARG00000087759ENSDART00000126759CIL_0000C0_0002ENSG00000143771ENST00000366856ENST00000366857ENST00000366860ENST00000465271ENST00000468318ENSG00000143786ENST00000272133ENST00000470602ENST00000470788ENST00000471578ENST00000478120ENST00000479227ENST00000483512ENST00000492470ENST00000496372ENST00000498126ENST00000498382ENSG00000162923ENST00000414423ENST00000443112ENST00000480676ENST00000486652ENSG00000266618ENST00000581069CIL_0000C0_0003ENSMUSG00000038733ENSMUST00000036329ENSMUST00000162819ENSMUST00000162963ENSMUSG00000062169ENSMUST00000075968ENSMUST00000111057ENSMUST00000111059ENSMUST00000134115
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000062310 ENSDART00000089944 N/A N/A N/A 4.038±0.00 N/A N/A 2.979±0.00 N/A 0.399±0.00 N/A N/A N/A N/A N/A
ENSDARG00000087759 ENSDART00000126759 N/A N/A N/A 3.644±2.25 N/A N/A 1.477±0.81 1.491±0.52 0.417±0.00 N/A 1.015±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000143771 ENST00000366856 14.805±0.00 8.446±0.00 0.917±0.00 N/A 8.949±0.00 8.476±0.00 2.987±2.06 5.895±4.37 4.239±0.00 9.595±0.00 2.896±0.79 10.058±5.07 6.854±0.30 7.624±1.65
ENST00000366857 1.041±0.00 N/A N/A N/A 0.895±0.00 N/A 0.134±0.00 0.895±0.00 0.740±0.00 N/A N/A 0.677±0.00 0.816±0.00 N/A
ENST00000366858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000366860 9.084±0.00 5.873±0.00 N/A N/A 5.509±0.00 6.380±0.00 4.539±0.00 4.739±0.00 4.679±0.00 12.290±0.00 2.363±0.00 5.649±1.93 5.628±1.20 5.163±1.17
ENST00000465271 2.513±0.00 1.863±0.00 1.149±0.00 2.752±0.29 1.627±0.24 1.639±0.39 0.918±0.44 3.594±0.00 0.836±0.34 1.668±0.57 1.332±0.60 2.124±1.88 1.706±0.52 1.287±0.43
ENST00000468318 N/A N/A N/A 1.596±0.88 1.806±0.01 3.339±1.04 1.805±0.00 3.442±2.30 1.701±0.41 2.192±0.00 1.632±0.00 2.113±0.60 4.185±1.20 2.138±1.04
ENST00000469200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000143786 ENST00000272133 0.293±0.00 0.482±0.00 N/A 4.169±2.02 0.314±0.19 0.333±0.00 0.037±0.00 0.355±0.12 0.127±0.00 N/A 0.048±0.00 0.851±0.67 0.071±0.02 2.101±1.35
ENST00000470602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.388±0.00 N/A N/A N/A
ENST00000470788 N/A 0.739±0.00 0.217±0.00 N/A 0.382±0.00 N/A 0.179±0.00 N/A 0.082±0.00 0.197±0.00 N/A N/A N/A N/A
ENST00000471578 N/A N/A N/A N/A N/A N/A 0.100±0.00 N/A 0.148±0.00 N/A N/A N/A 0.155±0.02 N/A
ENST00000478120 N/A N/A N/A N/A N/A N/A 0.219±0.00 N/A N/A N/A N/A N/A 0.165±0.00 N/A
ENST00000479227 N/A N/A N/A N/A 0.149±0.00 N/A 0.146±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000481095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483512 0.535±0.00 N/A N/A N/A N/A N/A N/A 0.606±0.00 0.395±0.00 0.271±0.00 N/A 0.899±0.55 0.438±0.09 N/A
ENST00000489556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492470 N/A N/A 0.592±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496372 N/A N/A N/A N/A N/A N/A N/A 0.495±0.00 0.188±0.00 N/A N/A 1.389±0.00 N/A 1.687±0.00
ENST00000498126 0.425±0.00 N/A N/A N/A 0.824±0.00 0.384±0.00 N/A 1.122±0.00 0.258±0.00 0.654±0.00 0.826±0.00 1.041±0.55 0.453±0.18 N/A
ENST00000498382 N/A N/A N/A N/A N/A 0.411±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000162923 ENST00000414423 12.771±0.00 10.265±0.00 3.744±0.00 7.392±3.29 13.675±0.00 5.951±2.20 5.328±2.28 7.025±0.00 3.471±0.83 10.533±0.00 9.560±0.00 5.638±2.74 1.575±0.45 6.141±0.00
ENST00000443112 N/A N/A 6.564±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.790±0.00 6.871±0.28 8.808±0.00 18.628±0.00
ENST00000486652 12.372±0.00 9.099±0.00 N/A N/A N/A 6.874±0.00 5.576±0.00 6.840±0.00 3.069±0.00 7.027±0.00 6.392±0.00 8.289±0.00 9.908±3.16 21.589±5.98
ENST00000489825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000266618 ENST00000581069 1.229±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038733 ENSMUST00000036329 7.600±1.65 23.803±7.54 N/A 8.867±2.84 7.917±0.41 9.113±0.87 4.981±1.11 N/A 5.720±0.40 10.046±2.76 N/A 19.018±8.78 18.859±7.26 18.064±7.37
ENSMUST00000159290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162819 5.573±0.54 N/A 6.617±0.04 4.585±1.67 5.455±1.19 N/A 4.313±1.13 3.004±0.23 11.548±6.34 5.163±1.25 6.823±1.08 4.534±0.89 4.928±1.57 3.014±0.92
ENSMUST00000162963 17.068±0.94 27.818±3.83 15.945±0.57 9.001±3.56 23.056±4.18 15.927±3.93 8.835±2.21 12.411±1.48 19.708±9.36 19.406±2.34 9.463±1.47 15.586±7.18 9.315±4.12 5.888±1.27
ENSMUSG00000062169 ENSMUST00000075968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.004±0.00 11.904±4.02 N/A
ENSMUST00000111057 N/A N/A N/A N/A 7.824±0.00 N/A N/A N/A 3.961±1.17 N/A 9.157±0.93 15.772±0.43 21.786±10.26 3.408±0.00
ENSMUST00000111059 N/A N/A N/A 4.517±0.00 N/A N/A N/A N/A N/A N/A N/A 4.570±0.00 4.257±0.63 0.433±0.00
ENSMUST00000134115 8.925±1.96 7.669±0.50 9.145±0.31 5.648±2.38 7.378±0.93 10.690±1.39 9.492±0.51 10.248±1.87 4.473±1.71 8.866±0.98 7.320±0.51 11.995±3.15 7.453±3.28 2.630±0.10

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