C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005S3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000143748-ENSG00000143771 CGP 9606 1:224227334-224379459
GeneTranscriptPositionBiotype
ENSG00000143748 (NVL)
nuclear VCP-like 		ENST00000281701 (NVL-001) 224227334-224330387 protein_coding
ENST00000340871 (NVL-017) 224227454-224330139 protein_coding
ENST00000391875 (NVL-002) 224227334-224330170 protein_coding
ENST00000436927 (NVL-006) 224304736-224330128 protein_coding
ENST00000461466 (NVL-020) 224307993-224330179 processed_transcript
ENST00000461546 (NVL-019) 224308183-224330179 protein_coding
ENST00000462893 (NVL-026) 224289185-224294341 retained_intron
ENST00000467882 (NVL-014) 224289682-224330137 nonsense_mediated_decay
ENST00000468088 (NVL-021) 224317694-224330172 processed_transcript
ENST00000468673 (NVL-016) 224312540-224330148 retained_intron
ENST00000469075 (NVL-018) 224227369-224330138 protein_coding
ENST00000469968 (NVL-003) 224227334-224330121 protein_coding
ENST00000470903 (NVL-004) 224307986-224330187 processed_transcript
ENST00000470989 (NVL-022) 224305084-224330168 nonsense_mediated_decay
ENST00000481213 (NVL-010) 224227334-224233289 nonsense_mediated_decay
ENST00000482491 (NVL-201) 224227337-224330189 protein_coding
ENST00000483094 (NVL-011) 224227334-224236582 processed_transcript
ENST00000487758 (NVL-009) 224312727-224330132 retained_intron
ENST00000488718 (NVL-024) 224304735-224330138 protein_coding
ENST00000489194 (NVL-012) 224227334-224268133 processed_transcript
ENST00000492281 (NVL-023) 224304735-224330139 protein_coding
ENST00000493060 (NVL-015) 224227334-224236647 retained_intron
ENST00000496393 (NVL-013) 224231266-224269915 processed_transcript
ENST00000498767 (NVL-025) 224308008-224312124 retained_intron
ENSG00000143771 (CNIH4)
cornichon family AMPA receptor auxiliary protein 4 		ENST00000366856 (CNIH4-005) 224356893-224379452 protein_coding
ENST00000366857 (CNIH4-002) 224356871-224379452 protein_coding
ENST00000366858 (CNIH4-004) 224356858-224379452 protein_coding
ENST00000366860 (CNIH4-006) 224356887-224375998 processed_transcript
ENST00000465271 (CNIH4-001) 224356850-224379452 protein_coding
ENST00000468318 (CNIH4-003) 224356888-224376884 processed_transcript
ENST00000469200 (CNIH4-008) 224377051-224379459 processed_transcript
ENST00000477413 (CNIH4-007) 224356921-224371297 processed_transcript
ENSG00000221406 (MIR320B2)
microRNA 320b-2 		ENST00000408479 (MIR320B2-201) 224257004-224257141 miRNA
ENSG00000229742 (RP11-365O16.5)
 ENST00000441469 (RP11-365O16.5-001) 224297646-224298600 processed_pseudogene
CIL_0005S3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026516-ENSMUSG00000062169 CGP 10090 1:181093423-181168994
GeneTranscriptPositionBiotype
ENSMUSG00000026516 (Nvl)
nuclear VCP-like 		ENSMUST00000027797 (Nvl-201) 181093423-181144157 protein_coding
ENSMUSG00000062169 (Cnih4)
cornichon homolog 4 (Drosophila) 		ENSMUST00000075968 (Cnih4-002) 181154738-181166381 processed_transcript
ENSMUST00000111057 (Cnih4-003) 181155720-181166349 retained_intron
ENSMUST00000111059 (Cnih4-004) 181150931-181168994 protein_coding
ENSMUST00000134115 (Cnih4-001) 181150931-181168994 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005S3_0001ENSG00000143748ENST00000281701ENST00000340871ENST00000391875ENST00000436927ENST00000461466ENST00000461546ENST00000462893ENST00000467882ENST00000468088ENST00000468673ENST00000469075ENST00000469968ENST00000470903ENST00000470989ENST00000481213ENST00000482491ENST00000483094ENST00000487758ENST00000488718ENST00000489194ENST00000492281ENST00000493060ENST00000496393ENST00000498767ENSG00000143771ENST00000366856ENST00000366857ENST00000366858ENST00000366860ENST00000465271ENST00000468318ENST00000469200ENST00000477413ENSG00000221406ENST00000408479ENSG00000229742ENST00000441469CIL_0005S3_0002ENSMUSG00000026516ENSMUST00000027797ENSMUSG00000062169ENSMUST00000075968ENSMUST00000111057ENSMUST00000111059ENSMUST00000134115
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005S3_0001ENSG00000143748ENST00000281701ENST00000340871ENST00000391875ENST00000436927ENST00000461466ENST00000461546ENST00000467882ENST00000468673ENST00000469075ENST00000469968ENST00000482491ENST00000488718ENST00000489194ENSG00000143771ENST00000366856ENST00000366857ENST00000366860ENST00000465271ENST00000468318ENSG00000221406ENST00000408479ENSG00000229742ENST00000441469CIL_0005S3_0002ENSMUSG00000026516ENSMUST00000027797ENSMUSG00000062169ENSMUST00000075968ENSMUST00000111057ENSMUST00000111059ENSMUST00000134115
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000143748 ENST00000281701 N/A N/A 0.287±0.00 N/A N/A N/A 0.266±0.00 N/A N/A 0.471±0.00 N/A 0.798±0.00 4.598±0.00 2.948±0.00
ENST00000340871 N/A N/A N/A 1.128±0.00 N/A 0.445±0.00 0.584±0.00 0.784±0.53 0.342±0.00 N/A N/A N/A N/A 1.109±0.00
ENST00000391875 1.742±0.00 3.341±0.00 N/A 0.555±0.08 3.506±0.00 1.342±0.00 0.420±0.28 1.974±0.00 0.494±0.02 N/A 0.401±0.00 3.130±1.35 2.763±0.56 2.116±0.00
ENST00000436927 N/A N/A N/A N/A N/A N/A N/A N/A 1.411±0.00 N/A N/A N/A N/A N/A
ENST00000461466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.535±0.00 N/A N/A N/A
ENST00000461546 N/A N/A N/A 2.479±0.00 N/A N/A N/A N/A N/A 3.066±0.00 N/A N/A N/A 6.270±0.00
ENST00000462893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467882 N/A N/A 0.601±0.00 N/A 2.423±0.00 N/A 0.158±0.00 N/A N/A 1.308±0.00 0.278±0.00 2.174±0.00 N/A N/A
ENST00000468088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468673 N/A N/A 1.092±0.00 N/A N/A N/A 0.429±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000469075 N/A N/A N/A N/A N/A 2.410±0.00 N/A N/A 1.177±0.00 0.872±0.00 N/A 4.343±0.00 2.978±1.76 1.674±0.77
ENST00000469968 N/A N/A N/A N/A N/A N/A N/A N/A 0.473±0.00 N/A N/A N/A N/A 0.959±0.00
ENST00000470903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482491 0.522±0.00 N/A N/A 0.816±0.00 0.608±0.00 N/A N/A 0.233±0.00 0.399±0.00 0.540±0.00 N/A 1.803±0.59 1.661±0.00 N/A
ENST00000483094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488718 N/A N/A N/A N/A N/A N/A N/A 3.951±0.00 N/A N/A N/A N/A N/A N/A
ENST00000489194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.326±0.65 N/A N/A N/A
ENST00000492281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000143771 ENST00000366856 14.805±0.00 8.446±0.00 0.917±0.00 N/A 8.949±0.00 8.476±0.00 2.987±2.06 5.895±4.37 4.239±0.00 9.595±0.00 2.896±0.79 10.058±5.07 6.854±0.30 7.624±1.65
ENST00000366857 1.041±0.00 N/A N/A N/A 0.895±0.00 N/A 0.134±0.00 0.895±0.00 0.740±0.00 N/A N/A 0.677±0.00 0.816±0.00 N/A
ENST00000366858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000366860 9.084±0.00 5.873±0.00 N/A N/A 5.509±0.00 6.380±0.00 4.539±0.00 4.739±0.00 4.679±0.00 12.290±0.00 2.363±0.00 5.649±1.93 5.628±1.20 5.163±1.17
ENST00000465271 2.513±0.00 1.863±0.00 1.149±0.00 2.752±0.29 1.627±0.24 1.639±0.39 0.918±0.44 3.594±0.00 0.836±0.34 1.668±0.57 1.332±0.60 2.124±1.88 1.706±0.52 1.287±0.43
ENST00000468318 N/A N/A N/A 1.596±0.88 1.806±0.01 3.339±1.04 1.805±0.00 3.442±2.30 1.701±0.41 2.192±0.00 1.632±0.00 2.113±0.60 4.185±1.20 2.138±1.04
ENST00000469200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221406 ENST00000408479 0.145±0.00 0.733±0.00 N/A 1.093±0.00 N/A 0.528±0.00 N/A N/A N/A N/A N/A 3.995±0.00 2.058±0.00 1.809±1.40
ENSG00000229742 ENST00000441469 N/A 0.217±0.00 N/A N/A N/A 0.098±0.07 0.025±0.00 N/A 0.025±0.00 0.102±0.00 0.195±0.00 N/A N/A 0.096±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026516 ENSMUST00000027797 3.122±1.15 1.741±0.54 6.872±2.04 11.575±3.96 2.943±0.32 1.960±0.74 1.742±0.35 2.133±1.24 6.218±5.51 2.440±1.23 1.876±0.58 7.273±7.30 14.846±10.73 4.637±1.98
ENSMUSG00000062169 ENSMUST00000075968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.004±0.00 11.904±4.02 N/A
ENSMUST00000111057 N/A N/A N/A N/A 7.824±0.00 N/A N/A N/A 3.961±1.17 N/A 9.157±0.93 15.772±0.43 21.786±10.26 3.408±0.00
ENSMUST00000111059 N/A N/A N/A 4.517±0.00 N/A N/A N/A N/A N/A N/A N/A 4.570±0.00 4.257±0.63 0.433±0.00
ENSMUST00000134115 8.925±1.96 7.669±0.50 9.145±0.31 5.648±2.38 7.378±0.93 10.690±1.39 9.492±0.51 10.248±1.87 4.473±1.71 8.866±0.98 7.320±0.51 11.995±3.15 7.453±3.28 2.630±0.10

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