C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heparan sulfate 6-O-sulfotransferase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062184 Hs6st2 10090 - X:51387212-51681856 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000088172 Hs6st2-001 51387212-51681703 protein_coding
  ENSMUST00000114871 Hs6st2-002 51387212-51681856 protein_coding
  ENSMUST00000140145 Hs6st2-004 51680178-51681086 processed_transcript
  ENSMUST00000142738 Hs6st2-003 51676783-51681348 retained_intron
  ENSMUST00000142983 Hs6st2-005 51679992-51680565 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088172ENSMUST00000114871ENSMUST00000140145ENSMUST00000142738ENSMUST00000142983
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088172 0.070±0.04 0.977±0.56 0.053±0.01 4.471±0.74 0.126±0.06 0.026±0.02 0.226±0.07 0.118±0.05 0.186±0.00 0.284±0.15 0.941±0.25 N/A 0.164±0.06
ENSMUST00000114871 N/A 2.412±0.42 0.024±0.00 N/A 0.095±0.05 0.060±0.02 0.534±0.09 0.175±0.11 0.615±0.12 N/A 3.263±0.95 0.647±0.10 0.101±0.02
ENSMUST00000140145 N/A N/A N/A N/A N/A N/A 1.467±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000142738 0.027±0.00 N/A N/A N/A 0.031±0.00 0.015±0.00 N/A 0.039±0.00 N/A N/A N/A N/A N/A
ENSMUST00000142983 0.228±0.00 3.199±0.36 N/A N/A 0.222±0.06 0.445±0.24 1.022±0.00 N/A 1.233±0.27 N/A 3.905±0.00 N/A 0.424±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000T0 CIL_0000T0_0002 CGP X:51117269-51681856
CIL_0000SS CIL_0000SS_0002 CGP X:51387212-51801233

Gene Ontology
GO IDEvidence TypeGO Description
GO:0015015 IDA heparan sulfate proteoglycan biosynthetic process, enzymatic modification
GO:0016021 IEA integral component of membrane
GO:0017095 IDA heparan sulfate 6-O-sulfotransferase activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000171004 HS6ST2 heparan sulfate 6-O-sulfotransferase 2 protein_coding Homo_sapiens

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