C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000SS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171004-ENSG00000134588 CGP 9606 X:132626016-133097109
GeneTranscriptPositionBiotype
ENSG00000134588 (USP26)
ubiquitin specific peptidase 26 		ENST00000370832 (USP26-001) 133024631-133028272 protein_coding
ENST00000417459 (USP26-003) 133045863-133097109 processed_transcript
ENST00000511190 (USP26-002) 133025026-133097107 protein_coding
ENSG00000171004 (HS6ST2)
heparan sulfate 6-O-sulfotransferase 2 		ENST00000370833 (HS6ST2-201) 132628223-132958602 protein_coding
ENST00000370836 (HS6ST2-002) 132626016-132961395 protein_coding
ENST00000406696 (HS6ST2-202) 132628223-132958602 protein_coding
ENST00000521489 (HS6ST2-004) 132627970-132961395 protein_coding
ENST00000602570 (HS6ST2-005) 132735084-132758332 processed_transcript
ENSG00000227064 (RP3-363L9.1)
 ENST00000428456 (RP3-363L9.1-001) 132907279-132907575 processed_pseudogene
ENSG00000235849 (HS6ST2-AS1)
HS6ST2 antisense RNA 1 		ENST00000455269 (HS6ST2-AS1-001) 132667642-132669888 antisense
CIL_0000SS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062184-ENSMUSG00000055780 CGP 10090 X:51387212-51801233
GeneTranscriptPositionBiotype
ENSMUSG00000055780 (Usp26)
ubiquitin specific peptidase 26 		ENSMUST00000069509 (Usp26-201) 51753959-51801144 protein_coding
ENSMUST00000114869 (Usp26-001) 51753959-51801233 protein_coding
ENSMUSG00000062184 (Hs6st2)
heparan sulfate 6-O-sulfotransferase 2 		ENSMUST00000088172 (Hs6st2-001) 51387212-51681703 protein_coding
ENSMUST00000114871 (Hs6st2-002) 51387212-51681856 protein_coding
ENSMUST00000140145 (Hs6st2-004) 51680178-51681086 processed_transcript
ENSMUST00000142738 (Hs6st2-003) 51676783-51681348 retained_intron
ENSMUST00000142983 (Hs6st2-005) 51679992-51680565 processed_transcript
ENSMUSG00000082968 (Gm14581)
predicted gene 14581 		ENSMUST00000121726 (Gm14581-001) 51629490-51629687 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000SS_0001ENSG00000134588ENST00000370832ENST00000417459ENST00000511190ENSG00000171004ENST00000370833ENST00000370836ENST00000406696ENST00000521489ENST00000602570ENSG00000227064ENST00000428456ENSG00000235849ENST00000455269CIL_0000SS_0002ENSMUSG00000055780ENSMUST00000069509ENSMUST00000114869ENSMUSG00000062184ENSMUST00000088172ENSMUST00000114871ENSMUST00000140145ENSMUST00000142738ENSMUST00000142983ENSMUSG00000082968ENSMUST00000121726
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000SS_0001ENSG00000134588ENST00000370832ENST00000417459ENST00000511190ENSG00000171004ENST00000370833ENST00000370836ENST00000406696ENST00000602570ENSG00000227064ENST00000428456ENSG00000235849ENST00000455269CIL_0000SS_0002ENSMUSG00000055780ENSMUST00000069509ENSMUST00000114869ENSMUSG00000062184ENSMUST00000088172ENSMUST00000114871ENSMUST00000140145ENSMUST00000142738ENSMUST00000142983ENSMUSG00000082968ENSMUST00000121726
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134588 ENST00000370832 N/A 0.006±0.00 N/A N/A N/A N/A 0.003±0.00 N/A N/A N/A N/A N/A N/A 0.235±0.05
ENST00000417459 N/A 0.100±0.00 N/A N/A N/A N/A N/A 0.133±0.00 N/A 0.184±0.00 N/A 0.052±0.00 N/A N/A
ENST00000511190 N/A N/A N/A N/A N/A N/A 0.005±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000171004 ENST00000370833 N/A N/A N/A 1.734±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000370836 0.049±0.00 0.140±0.00 0.823±0.00 N/A 0.116±0.11 0.092±0.01 0.084±0.06 8.065±0.00 0.112±0.00 0.271±0.25 0.035±0.00 1.770±0.00 2.062±0.39 1.026±0.00
ENST00000406696 N/A N/A 1.769±0.00 N/A N/A 0.098±0.02 0.138±0.00 N/A 0.346±0.00 N/A 0.147±0.07 2.399±0.94 8.503±0.00 0.772±0.00
ENST00000521489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.035±0.00
ENSG00000227064 ENST00000428456 N/A N/A N/A N/A N/A N/A 1.363±0.00 0.203±0.00 N/A N/A N/A 0.132±0.00 N/A N/A
ENSG00000235849 ENST00000455269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.068±0.00 0.019±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000055780 ENSMUST00000069509 N/A N/A 0.002±0.00 0.001±0.00 N/A N/A 0.005±0.00 N/A 0.004±0.00 N/A N/A 0.006±0.00 0.013±0.01 1.491±0.00
ENSMUST00000114869 N/A N/A 0.002±0.00 0.001±0.00 N/A N/A 0.005±0.00 N/A 0.002±0.00 N/A N/A 0.004±0.00 0.003±0.00 N/A
ENSMUSG00000062184 ENSMUST00000088172 0.070±0.04 0.977±0.56 0.053±0.01 4.471±0.74 0.126±0.06 N/A 0.026±0.02 0.226±0.07 0.118±0.05 0.186±0.00 0.284±0.15 0.941±0.25 N/A 0.164±0.06
ENSMUST00000114871 N/A 2.412±0.42 0.024±0.00 N/A 0.095±0.05 N/A 0.060±0.02 0.534±0.09 0.175±0.11 0.615±0.12 N/A 3.263±0.95 0.647±0.10 0.101±0.02
ENSMUST00000140145 N/A N/A N/A N/A N/A N/A N/A 1.467±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000142738 0.027±0.00 N/A N/A N/A 0.031±0.00 N/A 0.015±0.00 N/A 0.039±0.00 N/A N/A N/A N/A N/A
ENSMUST00000142983 0.228±0.00 3.199±0.36 N/A N/A 0.222±0.06 N/A 0.445±0.24 1.022±0.00 N/A 1.233±0.27 N/A 3.905±0.00 N/A 0.424±0.22
ENSMUSG00000082968 ENSMUST00000121726 N/A N/A N/A 0.731±0.35 N/A N/A N/A N/A 0.681±0.00 N/A N/A N/A N/A 2.418±0.00

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