C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heparan sulfate 6-O-sulfotransferase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114871 Hs6st2-002 ENSMUSG00000062184 10090 - X:51387212-51681856 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000114871
Transcript ID Adrenal Bladder Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000114871 2.412±0.42 0.024±0.00 0.095±0.05 0.060±0.02 0.534±0.09 0.175±0.11 0.615±0.12 3.263±0.95 0.647±0.10 0.101±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000T0 CIL_0000T0_0002 CGP X:51117269-51681856
CIL_0000SS CIL_0000SS_0002 CGP X:51387212-51801233

Gene Ontology

GO IDEvidence TypeGO Description
GO:0015015 IDA heparan sulfate proteoglycan biosynthetic process, enzymatic modification
GO:0016021 IEA integral component of membrane
GO:0017095 IDA heparan sulfate 6-O-sulfotransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259241 HS6ST1-001 protein_coding Homo_sapiens 0 344
ENST00000370833 HS6ST2-201 protein_coding Homo_sapiens 0 1386
ENST00000370836 HS6ST2-002 protein_coding Homo_sapiens 0 3716
ENST00000376705 HS6ST3-001 protein_coding Homo_sapiens 0 433
ENST00000406696 HS6ST2-202 protein_coding Homo_sapiens 0 2429
ENST00000469019 HS6ST1-003 processed_transcript Homo_sapiens 0 211
ENST00000481504 HS6ST1P1-001 processed_pseudogene Homo_sapiens 0 340
ENST00000494089 HS6ST1-002 processed_transcript Homo_sapiens 0 211
ENST00000521489 HS6ST2-004 protein_coding Homo_sapiens 0 1711

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