C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heparan sulfate 6-O-sulfotransferase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088172 Hs6st2-001 ENSMUSG00000062184 10090 - X:51387212-51681703 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000088172
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000088172 0.070±0.04 0.977±0.56 0.053±0.01 4.471±0.74 0.126±0.06 0.026±0.02 0.226±0.07 0.118±0.05 0.186±0.00 0.284±0.15 0.941±0.25 0.164±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000T0 CIL_0000T0_0002 CGP X:51117269-51681856
CIL_0000SS CIL_0000SS_0002 CGP X:51387212-51801233

Gene Ontology

GO IDEvidence TypeGO Description
GO:0015015 IDA heparan sulfate proteoglycan biosynthetic process, enzymatic modification
GO:0016021 IEA integral component of membrane
GO:0017095 IDA heparan sulfate 6-O-sulfotransferase activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259241 HS6ST1-001 protein_coding Homo_sapiens 0 211
ENST00000370833 HS6ST2-201 protein_coding Homo_sapiens 0 2573
ENST00000370836 HS6ST2-002 protein_coding Homo_sapiens 0 2008
ENST00000376705 HS6ST3-001 protein_coding Homo_sapiens 0 276
ENST00000406696 HS6ST2-202 protein_coding Homo_sapiens 0 1386
ENST00000469019 HS6ST1-003 processed_transcript Homo_sapiens 0 211
ENST00000481504 HS6ST1P1-001 processed_pseudogene Homo_sapiens 0 211
ENST00000494089 HS6ST1-002 processed_transcript Homo_sapiens 0 211
ENST00000521489 HS6ST2-004 protein_coding Homo_sapiens 0 2955

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