C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L7A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062647 Rpl7a 10090 + 2:26910764-26913318 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102898 Rpl7a-001 26910764-26913318 protein_coding
  ENSMUST00000129673 Rpl7a-005 26912192-26913318 processed_transcript
  ENSMUST00000136269 Rpl7a-002 26910817-26913057 processed_transcript
  ENSMUST00000137376 Rpl7a-004 26910821-26913318 processed_transcript
  ENSMUST00000143678 Rpl7a-003 26911006-26913318 processed_transcript
  ENSMUST00000147143 Rpl7a-007 26912619-26913318 processed_transcript
  ENSMUST00000149339 Rpl7a-006 26912671-26913212 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102898ENSMUST00000136269ENSMUST00000149339
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102898 284.453±92.39 93.604±12.66 564.283±18.12 365.477±216.70 208.301±18.61 355.477±74.48 152.255±26.50 349.630±30.35 570.812±404.52 179.649±8.82 224.342±9.34 484.790±115.00 571.907±285.09 95.421±40.05
ENSMUST00000136269 N/A 34.045±5.34 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149339 N/A N/A N/A 54.147±0.00 N/A N/A N/A N/A N/A N/A N/A 334.896±0.00 200.996±0.00 50.233±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DH CIL_0006DH_0002 CGP 2:26905262-26913318
CIL_0006DK CIL_0006DK_0002 CGP 2:26910764-26916530

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0016020 IDA membrane
GO:0042254 IEA ribosome biogenesis
GO:0042788 IDA polysomal ribosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019230 rpl7a ribosomal protein L7a protein_coding Danio_rerio
ENSG00000148303 RPL7A ribosomal protein L7a protein_coding Homo_sapiens

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