C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136269 Rpl7a-002 ENSMUSG00000062647 10090 + 2:26910817-26913057 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalENSMUST00000136269
Transcript ID Adrenal
ENSMUST00000136269 34.045±5.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DH CIL_0006DH_0002 CGP 2:26905262-26913318
CIL_0006DK CIL_0006DK_0002 CGP 2:26910764-26916530

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315731 RPL7A-005 protein_coding Homo_sapiens 0 207
ENST00000323345 RPL7A-009 protein_coding Homo_sapiens 0 797
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 568
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 540
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 658
ENST00000417617 AC004129.9-001 processed_pseudogene Homo_sapiens 0 540
ENST00000418052 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 662
ENST00000423357 RPL7AP25-001 processed_pseudogene Homo_sapiens 2.00386e-43 180
ENST00000424041 RPL7AP14-001 processed_pseudogene Homo_sapiens 0 640
ENST00000426573 RP4-738P11.4-001 processed_pseudogene Homo_sapiens 0 466
ENST00000426651 RPL7A-004 protein_coding Homo_sapiens 0 577
ENST00000427056 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 673
ENST00000428027 RP11-534L20.4-001 processed_pseudogene Homo_sapiens 0 684
ENST00000429766 AC073900.4-001 processed_pseudogene Homo_sapiens 0 449
ENST00000430506 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 667
ENST00000430732 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 662
ENST00000434317 RP11-577H5.1-001 processed_pseudogene Homo_sapiens 0 568
ENST00000437448 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 662
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 508
ENST00000445592 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 667
ENST00000449688 RP4-738P11.3-001 processed_pseudogene Homo_sapiens 0 401
ENST00000451600 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 662
ENST00000452821 RP11-170M17.2-001 processed_pseudogene Homo_sapiens 0 689
ENST00000453064 RP11-467H10.1-001 processed_pseudogene Homo_sapiens 0 562
ENST00000453429 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 662
ENST00000463740 RPL7A-001 processed_transcript Homo_sapiens 0 575
ENST00000468019 RPL7A-003 processed_transcript Homo_sapiens 0 798
ENST00000469026 RPL7AP60-001 processed_pseudogene Homo_sapiens 0 682
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 617
ENST00000473913 RP11-463O9.1-001 processed_pseudogene Homo_sapiens 0 660
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 324
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 769
ENST00000482859 RPL7AP30-001 processed_pseudogene Homo_sapiens 0 712
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 503
ENST00000485706 RPL7A-006 processed_transcript Homo_sapiens 0 496
ENST00000486157 RP11-342F17.2-001 processed_pseudogene Homo_sapiens 0 549
ENST00000488538 RPL7AP26-001 processed_pseudogene Homo_sapiens 0 597
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 435
ENST00000496554 RPL7A-002 processed_transcript Homo_sapiens 0 665
ENST00000496790 FAM185A-005 processed_transcript Homo_sapiens 0 239
ENST00000497325 CTD-2270N23.1-001 processed_pseudogene Homo_sapiens 0 695
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 340
ENST00000557949 RP11-356M20.1-001 processed_pseudogene Homo_sapiens 0 438
ENST00000588490 RPL7AP66-001 processed_pseudogene Homo_sapiens 0 763

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