C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: catenin (cadherin associated protein), alpha 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000063063 Ctnna2 10090 - 6:76881637-77979699 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000075340 Ctnna2-201 76882550-77979560 protein_coding
  ENSMUST00000159626 Ctnna2-003 76881640-77979550 protein_coding
  ENSMUST00000160252 Ctnna2-005 77926505-77979585 processed_transcript
  ENSMUST00000160894 Ctnna2-002 76881637-77979699 protein_coding
  ENSMUST00000161846 Ctnna2-001 76881637-77979699 protein_coding
  ENSMUST00000162273 Ctnna2-004 77598746-77979560 protein_coding
  ENSMUST00000162991 Ctnna2-006 76882756-76902888 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075340ENSMUST00000159626ENSMUST00000160252ENSMUST00000160894ENSMUST00000161846ENSMUST00000162273ENSMUST00000162991
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075340 0.016±0.00 0.142±0.00 0.027±0.00 27.501±0.00 0.046±0.03 0.117±0.04 N/A 0.038±0.00 0.056±0.03 0.014±0.00 0.011±0.00 0.805±0.65 0.037±0.00 0.576±0.00
ENSMUST00000159626 N/A N/A 0.028±0.00 17.447±10.18 0.047±0.00 N/A 0.027±0.00 0.079±0.00 0.038±0.02 0.021±0.00 N/A 0.208±0.00 0.057±0.02 0.189±0.00
ENSMUST00000160252 0.133±0.00 0.582±0.00 N/A N/A N/A N/A 0.198±0.09 0.553±0.00 N/A N/A N/A 1.342±0.72 N/A N/A
ENSMUST00000160894 N/A N/A 0.034±0.00 20.090±0.20 0.038±0.00 0.180±0.06 0.041±0.00 0.076±0.00 0.032±0.00 N/A N/A 0.469±0.29 N/A 0.979±0.15
ENSMUST00000161846 0.018±0.00 0.189±0.11 N/A 14.302±3.01 N/A 0.221±0.07 0.026±0.00 0.055±0.01 0.032±0.01 N/A N/A 0.999±0.60 0.032±0.00 0.468±0.05
ENSMUST00000162273 N/A 0.155±0.00 N/A N/A 0.039±0.00 0.060±0.00 0.015±0.01 0.139±0.05 0.004±0.00 N/A 0.013±0.00 0.261±0.20 N/A N/A
ENSMUST00000162991 N/A N/A N/A N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NY CIL_0003NY_0002 CGP 6:76881637-77979699

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0005912 IDA adherens junction
GO:0005913 IDA cell-cell adherens junction
GO:0007155 IEA cell adhesion
GO:0007409 IMP axonogenesis
GO:0015629 IEA actin cytoskeleton
GO:0016323 IDA basolateral plasma membrane
GO:0016337 ISS single organismal cell-cell adhesion
GO:0021942 IMP radial glia guided migration of Purkinje cell
GO:0030027 IDA lamellipodium
GO:0030424 IMP axon
GO:0045296 IEA cadherin binding
GO:0048813 IMP dendrite morphogenesis
GO:0048854 IMP brain morphogenesis
GO:0051823 IMP regulation of synapse structural plasticity
GO:0060134 IMP prepulse inhibition

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024785 ctnna2 catenin (cadherin-associated protein), alpha 2 protein_coding Danio_rerio
ENSG00000066032 CTNNA2 catenin (cadherin-associated protein), alpha 2 protein_coding Homo_sapiens

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