C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: catenin (cadherin associated protein), alpha 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162273 Ctnna2-004 ENSMUSG00000063063 10090 - 6:77598746-77979560 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverMuscleOvaryENSMUST00000162273
Transcript ID Adrenal Breast Colon Heart Kidney Liver Muscle Ovary
ENSMUST00000162273 0.155±0.00 0.039±0.00 0.060±0.00 0.015±0.01 0.139±0.05 0.004±0.00 0.013±0.00 0.261±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NY CIL_0003NY_0002 CGP 6:76881637-77979699

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005912 IDA adherens junction
GO:0005913 IDA cell-cell adherens junction
GO:0007155 IEA cell adhesion
GO:0015629 IEA actin cytoskeleton
GO:0016323 IDA basolateral plasma membrane
GO:0030027 IDA lamellipodium
GO:0045296 IEA cadherin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000402739 CTNNA2-003 protein_coding Homo_sapiens 0 1315
ENST00000409266 CTNNA2-005 protein_coding Homo_sapiens 3e-34 148
ENST00000409971 CTNNA2-007 protein_coding Homo_sapiens 0 501
ENST00000451966 CTNNA2-006 protein_coding Homo_sapiens 0 289
ENST00000466387 CTNNA2-002 protein_coding Homo_sapiens 0 1317
ENST00000496558 CTNNA2-001 protein_coding Homo_sapiens 0 1447
ENST00000508970 CTNNA2-020 processed_transcript Homo_sapiens 0 287

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