C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lactate dehydrogenase A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000063229 Ldha 10090 + 7:46841475-46855627 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000005051 Ldha-002 46847131-46855626 protein_coding
  ENSMUST00000048209 Ldha-001 46845839-46855627 protein_coding
  ENSMUST00000092621 Ldha-006 46845863-46852003 protein_coding
  ENSMUST00000124696 Ldha-005 46845843-46848145 retained_intron
  ENSMUST00000125862 Ldha-004 46845843-46849045 processed_transcript
  ENSMUST00000132157 Ldha-008 46847505-46850996 retained_intron
  ENSMUST00000133062 Ldha-007 46846097-46849051 processed_transcript
  ENSMUST00000147535 Ldha-003 46841475-46851994 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005051ENSMUST00000048209
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 426.215±144.13
ENSMUST00000048209 556.530±124.01 156.780±24.96 159.968±8.40 75.984±35.16 787.375±305.56 497.340±46.86 339.993±19.73 317.029±14.57 459.743±208.86 173.193±21.61 1404.629±78.11 235.916±63.92 369.288±196.12 52.193±23.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000445 CIL_000445_0002 CGP 7:46796103-46855627
CIL_000369 CIL_000369_0002 CGP 7:46841475-46878142

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004459 IMP L-lactate dehydrogenase activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0005829 IDA cytosol
GO:0006096 IEA glycolytic process
GO:0016020 IEA membrane
GO:0019244 IC lactate biosynthetic process from pyruvate
GO:0021762 IEA substantia nigra development
GO:0031668 IDA cellular response to extracellular stimulus
GO:0035686 IDA sperm fibrous sheath
GO:0044262 IEA cellular carbohydrate metabolic process
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040856 ldha lactate dehydrogenase A4 protein_coding Danio_rerio
ENSG00000134333 LDHA lactate dehydrogenase A protein_coding Homo_sapiens

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