C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane emp24 protein transport domain containing 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000063406 Tmed5 10090 - 5:108106366-108132620 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000002837 Tmed5-001 108121627-108132620 protein_coding
  ENSMUST00000061203 Tmed5-002 108117661-108132583 protein_coding
  ENSMUST00000117759 Tmed5-005 108129467-108132533 protein_coding
  ENSMUST00000118036 Tmed5-003 108106366-108132565 protein_coding
  ENSMUST00000119437 Tmed5-004 108123061-108132549 protein_coding
  ENSMUST00000119784 Tmed5-006 108129722-108132530 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002837ENSMUST00000117759ENSMUST00000118036ENSMUST00000119784
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002837 10.330±3.05 11.692±0.00 7.985±1.24 4.228±1.40 12.006±5.08 5.505±1.45 3.343±0.80 3.997±0.72 8.540±1.10 7.611±1.42 5.095±0.22 7.325±1.22 10.097±2.36 N/A
ENSMUST00000117759 67.482±25.63 105.772±27.17 N/A N/A 75.454±18.65 29.791±5.51 14.699±5.10 25.783±4.59 39.736±4.53 45.090±2.13 N/A 47.438±6.02 N/A N/A
ENSMUST00000118036 N/A N/A N/A 23.232±0.00 N/A 5.887±0.00 N/A N/A N/A N/A N/A 16.140±9.47 43.032±0.00 19.207±0.00
ENSMUST00000119784 N/A 51.095±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.576±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZP CIL_0005ZP_0002 CGP 5:107908053-108109004
CIL_0005ZQ CIL_0005ZQ_0002 CGP 5:108065674-108132620
CIL_0005ZV CIL_0005ZV_0002 CGP 5:108106366-108232947

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005793 ISS endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IEA Golgi apparatus
GO:0005801 ISS cis-Golgi network
GO:0006810 IEA transport
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0070971 ISS endoplasmic reticulum exit site
GO:0090161 ISS Golgi ribbon formation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008765 tmed5 transmembrane emp24 protein transport domain containing 5 protein_coding Danio_rerio
ENSG00000117500 TMED5 transmembrane emp24 protein transport domain containing 5 protein_coding Homo_sapiens

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