C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane emp24 protein transport domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117759 Tmed5-005 ENSMUSG00000063406 10090 - 5:108129467-108132533 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryENSMUST00000117759
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000117759 67.482±25.63 105.772±27.17 75.454±18.65 29.791±5.51 14.699±5.10 25.783±4.59 39.736±4.53 45.090±2.13 47.438±6.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZP CIL_0005ZP_0002 CGP 5:107908053-108109004
CIL_0005ZQ CIL_0005ZQ_0002 CGP 5:108065674-108132620
CIL_0005ZV CIL_0005ZV_0002 CGP 5:108106366-108232947

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370280 TMED5-004 protein_coding Homo_sapiens 0 324
ENST00000370282 TMED5-001 protein_coding Homo_sapiens 0 324
ENST00000370290 TMED5-002 nonsense_mediated_decay Homo_sapiens 0 326
ENST00000479918 TMED5-005 protein_coding Homo_sapiens 0 324
ENST00000483033 TMED5-003 processed_transcript Homo_sapiens 7e-30 137

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