C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110007 Slc24a3-001 ENSMUSG00000063873 10090 + 2:145167754-145642166 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110007
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110007 5.640±0.91 1.169±0.42 19.051±3.05 7.323±7.46 1.857±0.74 3.565±1.07 0.383±0.14 0.386±0.09 0.168±0.10 1.388±0.25 0.271±0.00 2.910±0.99 0.717±0.38 1.385±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MZ CIL_0002MZ_0002 CGP 2:144823656-145642166
CIL_0002MY CIL_0002MY_0002 CGP 2:145167754-145887616

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0006813 IEA potassium ion transport
GO:0006816 IEA calcium ion transport
GO:0006874 TAS cellular calcium ion homeostasis
GO:0008273 IDA calcium, potassium:sodium antiporter activity
GO:0015293 IEA symporter activity
GO:0016021 IEA integral component of membrane
GO:0035725 IDA sodium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328041 SLC24A3-001 protein_coding Homo_sapiens 0 3742
ENST00000613834 SLC24A3-201 protein_coding Homo_sapiens 0 3500

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