C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pentatricopeptide repeat domain 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000063884 Ptcd3 10090 - 6:71880648-71908762 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000082094 Ptcd3-201 71880648-71908762 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000082094
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000082094 5.368±0.42 1.620±0.84 8.665±1.07 11.060±1.34 3.413±1.43 1.559±0.84 16.795±0.79 5.393±1.30 10.925±7.05 2.389±1.22 15.513±0.74 6.124±6.54 15.097±6.08 3.945±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QA CIL_0004QA_0002 CGP 6:71831331-71908762
CIL_0006Y1 CIL_0006Y1_0002 CGP 6:71880648-71979356

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0006417 IEA regulation of translation
GO:0019843 ISS rRNA binding
GO:0032543 ISS mitochondrial translation
GO:0043024 ISS ribosomal small subunit binding
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057494 ptcd3 pentatricopeptide repeat domain 3 protein_coding Danio_rerio
ENSG00000132300 PTCD3 pentatricopeptide repeat domain 3 protein_coding Homo_sapiens

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