C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7964
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042280 Gm7964-201 ENSMUSG00000063902 10090 + 7:83755904-83757356 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000042280
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000042280 0.497±0.46 0.078±0.02 0.139±0.06 0.016±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CN CIL_0009CN_0002 VISTA 7:83511918-84115428

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000351839 HNRNPK-012 protein_coding Homo_sapiens 0 1375
ENST00000360384 HNRNPK-002 protein_coding Homo_sapiens 0 1375
ENST00000376256 HNRNPK-006 retained_intron Homo_sapiens 0 200
ENST00000376263 HNRNPK-201 protein_coding Homo_sapiens 0 1341
ENST00000376281 HNRNPK-011 protein_coding Homo_sapiens 0 1341
ENST00000447355 HNRNPKP2-001 processed_pseudogene Homo_sapiens 0 1146
ENST00000457156 HNRNPK-005 protein_coding Homo_sapiens 0 1644
ENST00000472778 HNRNPK-008 nonsense_mediated_decay Homo_sapiens 0 339
ENST00000481820 HNRNPK-010 protein_coding Homo_sapiens 0 438
ENST00000483135 HNRNPK-004 retained_intron Homo_sapiens 0 339
ENST00000485383 HNRNPKP4-001 processed_pseudogene Homo_sapiens 0 1238
ENST00000492865 HNRNPK-009 retained_intron Homo_sapiens 0 416
ENST00000493362 HNRNPK-007 retained_intron Homo_sapiens 0 268
ENST00000510896 HNRNPKP1-001 processed_pseudogene Homo_sapiens 0 1162
ENST00000511537 HNRNPKP3-003 processed_transcript Homo_sapiens 0 957
ENST00000534639 HNRNPKP3-001 transcribed_processed_pseudogene Homo_sapiens 0 1074

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