C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: left-right determination factor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000066652 Lefty2 10090 + 1:180893108-180899103 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000085797 Lefty2-001 180893108-180899103 protein_coding
  ENSMUST00000155546 Lefty2-002 180894458-180897487 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartLiverLungOvaryPlacentaTestisENSMUST00000085797ENSMUST00000155546
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Liver Lung Ovary Placenta Testis
ENSMUST00000085797 0.050±0.03 0.126±0.03 0.025±0.00 0.029±0.00 0.040±0.00 0.042±0.01 0.012±0.01 0.044±0.03 0.068±0.05 0.018±0.00 0.035±0.00
ENSMUST00000155546 0.102±0.00 0.362±0.27 0.150±0.00 N/A N/A N/A 0.209±0.13 N/A 0.525±0.24 0.051±0.00 0.279±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005S1 CIL_0005S1_0002 CGP 1:180893108-180908087

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005125 IEA cytokine activity
GO:0005160 IEA transforming growth factor beta receptor binding
GO:0005576 TAS extracellular region
GO:0005615 IEA extracellular space
GO:0007275 IEA multicellular organismal development
GO:0008083 IEA growth factor activity
GO:0016049 IEA cell growth

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019920 lft1 lefty1 protein_coding Danio_rerio
ENSDARG00000044059 lft2 lefty2 protein_coding Danio_rerio
ENSG00000143768 LEFTY2 left-right determination factor 2 protein_coding Homo_sapiens
ENSG00000243709 LEFTY1 left-right determination factor 1 protein_coding Homo_sapiens

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