C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: left-right determination factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155546 Lefty2-002 ENSMUSG00000066652 10090 + 1:180894458-180897487 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderLiverOvaryPlacentaTestisENSMUST00000155546
Transcript ID Adipose Adrenal Bladder Liver Ovary Placenta Testis
ENSMUST00000155546 0.102±0.00 0.362±0.27 0.150±0.00 0.209±0.13 0.525±0.24 0.051±0.00 0.279±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005S1 CIL_0005S1_0002 CGP 1:180893108-180908087

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272134 LEFTY1-001 protein_coding Homo_sapiens 0 283
ENST00000366820 LEFTY2-001 protein_coding Homo_sapiens 0 294
ENST00000420304 LEFTY2-201 protein_coding Homo_sapiens 0 294
ENST00000432920 RP4-559A3.7-001 protein_coding Homo_sapiens 0 283
ENST00000474493 LEFTY2-002 processed_transcript Homo_sapiens 0 222
ENST00000616737 LEFTY2-202 protein_coding Homo_sapiens 0 294

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