C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: left-right determination factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085797 Lefty2-001 ENSMUSG00000066652 10090 + 1:180893108-180899103 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartLiverLungOvaryPlacentaTestisENSMUST00000085797
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Liver Lung Ovary Placenta Testis
ENSMUST00000085797 0.050±0.03 0.126±0.03 0.025±0.00 0.029±0.00 0.040±0.00 0.042±0.01 0.012±0.01 0.044±0.03 0.068±0.05 0.018±0.00 0.035±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005S1 CIL_0005S1_0002 CGP 1:180893108-180908087

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005125 IEA cytokine activity
GO:0005160 IEA transforming growth factor beta receptor binding
GO:0005576 TAS extracellular region
GO:0005615 IEA extracellular space
GO:0007275 IEA multicellular organismal development
GO:0008083 IEA growth factor activity
GO:0016049 IEA cell growth

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272134 LEFTY1-001 protein_coding Homo_sapiens 0 1024
ENST00000366820 LEFTY2-001 protein_coding Homo_sapiens 0 1013
ENST00000420304 LEFTY2-201 protein_coding Homo_sapiens 0 652
ENST00000432920 RP4-559A3.7-001 protein_coding Homo_sapiens 0 776
ENST00000474493 LEFTY2-002 processed_transcript Homo_sapiens 0 422
ENST00000616737 LEFTY2-202 protein_coding Homo_sapiens 0 1013

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