C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adaptor-related protein 5 complex, sigma 1 subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000068264 Ap5s1 10090 + 2:131207078-131213514 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000089506 Ap5s1-001 131210440-131213514 protein_coding
  ENSMUST00000110206 Ap5s1-005 131210604-131212864 protein_coding
  ENSMUST00000110208 Ap5s1-003 131210440-131213514 protein_coding
  ENSMUST00000110210 Ap5s1-002 131210424-131213511 protein_coding
  ENSMUST00000134086 Ap5s1-004 131210370-131213002 processed_transcript
  ENSMUST00000143546 Ap5s1-008 131207078-131211447 processed_transcript
  ENSMUST00000153097 Ap5s1-007 131207086-131212736 protein_coding
  ENSMUST00000153901 Ap5s1-006 131210397-131212594 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089506ENSMUST00000110206ENSMUST00000110208ENSMUST00000110210ENSMUST00000134086ENSMUST00000153097
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089506 N/A N/A N/A N/A 4.437±0.00 N/A N/A N/A 2.520±0.00 N/A N/A 2.394±0.00 1.582±0.71 N/A
ENSMUST00000110206 N/A 8.346±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110208 11.805±1.78 12.360±1.62 8.601±1.95 4.304±1.87 10.189±2.63 16.133±1.19 10.139±1.71 10.926±1.40 11.189±2.37 8.444±1.08 5.661±1.03 7.490±3.08 2.616±1.43 2.351±0.91
ENSMUST00000110210 N/A N/A N/A N/A N/A N/A N/A N/A 3.250±0.18 N/A N/A N/A N/A N/A
ENSMUST00000134086 7.339±2.26 11.118±1.52 8.861±0.00 7.017±0.00 9.101±1.72 9.947±2.82 5.916±1.11 6.516±0.89 6.251±1.18 8.236±0.48 3.743±0.96 8.149±3.21 2.184±0.20 2.593±0.26
ENSMUST00000153097 N/A 27.721±2.07 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034Y CIL_00034Y_0002 CGP 2:131186949-131213514
CIL_00034V CIL_00034V_0002 CGP 2:131207078-131248025

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000724 IEA double-strand break repair via homologous recombination
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005764 IEA lysosome
GO:0005770 IEA late endosome
GO:0015031 IEA protein transport
GO:0016197 IEA endosomal transport
GO:0030119 IEA AP-type membrane coat adaptor complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076755 ap5s1 adaptor-related protein complex 5, sigma 1 subunit protein_coding Danio_rerio
ENSG00000125843 AP5S1 adaptor-related protein complex 5, sigma 1 subunit protein_coding Homo_sapiens

Loading