C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00034V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125843-ENSG00000088888 CGP 9606 20:3820524-3876123
GeneTranscriptPositionBiotype
ENSG00000088888 (MAVS)
mitochondrial antiviral signaling protein
ENST00000416600 (MAVS-201) 3846799-3876123 protein_coding
ENST00000428216 (MAVS-001) 3846843-3876110 protein_coding
ENSG00000125843 (AP5S1)
adaptor-related protein complex 5, sigma 1 subunit
ENST00000246041 (AP5S1-201) 3820524-3825307 protein_coding
ENST00000379567 (AP5S1-004) 3820536-3825302 protein_coding
ENST00000379573 (AP5S1-003) 3820531-3825302 protein_coding
ENST00000455742 (AP5S1-002) 3820547-3823954 protein_coding
ENST00000615891 (AP5S1-001) 3820556-3828837 protein_coding
ENSG00000274949 (RP5-1009E24.9)
ENST00000620777 (RP5-1009E24.9-001) 3811384-3823882 processed_transcript
CIL_00034V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000068264-ENSMUSG00000037523 CGP 10090 2:131207078-131248025
GeneTranscriptPositionBiotype
ENSMUSG00000037523 (Mavs)
mitochondrial antiviral signaling protein
ENSMUST00000041362 (Mavs-001) 131234067-131248025 protein_coding
ENSMUST00000110199 (Mavs-003) 131234105-131248025 protein_coding
ENSMUST00000130597 (Mavs-002) 131234063-131248022 nonsense_mediated_decay
ENSMUST00000132694 (Mavs-004) 131241934-131245665 processed_transcript
ENSMUSG00000068264 (Ap5s1)
adaptor-related protein 5 complex, sigma 1 subunit
ENSMUST00000089506 (Ap5s1-001) 131210440-131213514 protein_coding
ENSMUST00000110206 (Ap5s1-005) 131210604-131212864 protein_coding
ENSMUST00000110208 (Ap5s1-003) 131210440-131213514 protein_coding
ENSMUST00000110210 (Ap5s1-002) 131210424-131213511 protein_coding
ENSMUST00000134086 (Ap5s1-004) 131210370-131213002 processed_transcript
ENSMUST00000143546 (Ap5s1-008) 131207078-131211447 processed_transcript
ENSMUST00000153097 (Ap5s1-007) 131207086-131212736 protein_coding
ENSMUST00000153901 (Ap5s1-006) 131210397-131212594 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00034V_0001ENSG00000088888ENST00000416600ENST00000428216ENSG00000125843ENST00000246041ENST00000379567ENST00000379573ENST00000455742ENST00000615891ENSG00000274949ENST00000620777CIL_00034V_0002ENSMUSG00000037523ENSMUST00000041362ENSMUST00000110199ENSMUST00000130597ENSMUST00000132694ENSMUSG00000068264ENSMUST00000089506ENSMUST00000110206ENSMUST00000110208ENSMUST00000110210ENSMUST00000134086ENSMUST00000143546ENSMUST00000153097ENSMUST00000153901
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00034V_0001ENSG00000088888ENST00000416600ENST00000428216ENSG00000125843ENST00000246041ENST00000379567ENST00000379573ENST00000455742ENST00000615891ENSG00000274949ENST00000620777CIL_00034V_0002ENSMUSG00000037523ENSMUST00000041362ENSMUST00000110199ENSMUST00000130597ENSMUSG00000068264ENSMUST00000089506ENSMUST00000110206ENSMUST00000110208ENSMUST00000110210ENSMUST00000134086ENSMUST00000153097
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000088888 ENST00000416600 N/A N/A N/A N/A N/A N/A 0.264±0.00 1.868±0.00 2.246±0.00 N/A N/A 2.091±1.14 N/A 1.340±0.58
ENST00000428216 14.364±0.00 10.736±0.00 2.986±0.00 3.249±2.33 8.950±5.78 7.442±2.43 6.543±5.05 6.636±4.44 3.294±0.29 3.705±1.30 12.987±7.98 8.279±3.44 5.747±2.14 3.401±2.81
ENSG00000125843 ENST00000246041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.592±0.00 N/A N/A N/A
ENST00000379567 N/A 1.839±0.00 0.129±0.00 1.819±0.06 2.851±2.03 N/A 0.928±0.38 2.123±1.61 3.316±0.00 1.282±0.58 2.276±0.00 3.081±0.59 4.136±0.75 4.263±0.54
ENST00000379573 1.815±0.00 3.971±0.00 N/A 1.296±0.00 N/A 1.290±0.00 2.816±0.00 3.132±0.00 2.125±0.00 N/A 0.860±0.00 2.083±0.95 4.574±1.56 1.577±0.47
ENST00000455742 1.515±0.00 N/A N/A N/A N/A 0.817±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615891 0.310±0.00 0.741±0.00 0.018±0.00 0.401±0.00 0.475±0.00 0.125±0.00 0.333±0.00 0.530±0.34 N/A 0.141±0.00 0.241±0.00 0.718±0.47 0.337±0.00 0.631±0.00
ENSG00000274949 ENST00000620777 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.665±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037523 ENSMUST00000041362 21.993±4.25 36.346±2.67 14.167±0.13 1.837±1.22 33.323±12.09 21.040±2.45 23.547±0.99 32.165±4.21 20.937±9.91 17.720±2.48 9.190±1.52 27.427±10.05 8.471±4.72 3.875±1.85
ENSMUST00000110199 10.060±2.11 9.568±1.05 4.817±1.51 0.339±0.15 12.469±1.07 16.750±3.48 4.714±1.05 18.801±3.12 19.396±10.29 6.127±0.86 6.697±1.82 11.331±3.32 3.478±1.52 1.353±0.78
ENSMUST00000130597 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.691±0.00 N/A N/A 1.081±0.00 N/A
ENSMUST00000132694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000068264 ENSMUST00000089506 N/A N/A N/A N/A 4.437±0.00 N/A N/A N/A 2.520±0.00 N/A N/A 2.394±0.00 1.582±0.71 N/A
ENSMUST00000110206 N/A 8.346±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110208 11.805±1.78 12.360±1.62 8.601±1.95 4.304±1.87 10.189±2.63 16.133±1.19 10.139±1.71 10.926±1.40 11.189±2.37 8.444±1.08 5.661±1.03 7.490±3.08 2.616±1.43 2.351±0.91
ENSMUST00000110210 N/A N/A N/A N/A N/A N/A N/A N/A 3.250±0.18 N/A N/A N/A N/A N/A
ENSMUST00000134086 7.339±2.26 11.118±1.52 8.861±0.00 7.017±0.00 9.101±1.72 9.947±2.82 5.916±1.11 6.516±0.89 6.251±1.18 8.236±0.48 3.743±0.96 8.149±3.21 2.184±0.20 2.593±0.26
ENSMUST00000143546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153097 N/A 27.721±2.07 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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