C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein 5 complex, sigma 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110208 Ap5s1-003 ENSMUSG00000068264 10090 + 2:131210440-131213514 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110208
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110208 11.805±1.78 12.360±1.62 8.601±1.95 4.304±1.87 10.189±2.63 16.133±1.19 10.139±1.71 10.926±1.40 11.189±2.37 8.444±1.08 5.661±1.03 7.490±3.08 2.616±1.43 2.351±0.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034Y CIL_00034Y_0002 CGP 2:131186949-131213514
CIL_00034V CIL_00034V_0002 CGP 2:131207078-131248025

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000724 IEA double-strand break repair via homologous recombination
GO:0003674 ND molecular_function
GO:0016197 IEA endosomal transport
GO:0030119 IEA AP-type membrane coat adaptor complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246041 AP5S1-201 protein_coding Homo_sapiens 0 619
ENST00000379567 AP5S1-004 protein_coding Homo_sapiens 0 616
ENST00000379573 AP5S1-003 protein_coding Homo_sapiens 0 592
ENST00000615891 AP5S1-001 protein_coding Homo_sapiens 0 612

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