C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: seryl-aminoacyl-tRNA synthetase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000068739 Sars 10090 - 3:108424865-108445209 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000090553 Sars-001 108424865-108445198 protein_coding
  ENSMUST00000102625 Sars-002 108426612-108445169 protein_coding
  ENSMUST00000132467 Sars-004 108428231-108445143 protein_coding
  ENSMUST00000153499 Sars-003 108429350-108445209 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090553ENSMUST00000102625ENSMUST00000132467ENSMUST00000153499
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090553 N/A 6.170±0.18 N/A 3.079±0.17 4.088±1.10 7.378±1.46 3.310±0.73 10.933±0.35 3.386±1.02 6.846±1.27 N/A 9.120±3.46 N/A 1.880±0.56
ENSMUST00000102625 8.160±0.90 27.423±2.27 20.619±0.26 62.905±46.32 17.569±5.30 20.628±1.28 8.134±3.23 22.024±0.73 16.797±6.69 17.846±1.72 25.492±2.81 25.379±18.70 77.528±35.65 6.891±6.42
ENSMUST00000132467 N/A N/A N/A N/A 4.874±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.465±0.00 48.781±12.11 24.565±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442
CIL_00098X CIL_00098X_0002 VISTA 3:108109603-108712500

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004828 IEA serine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006434 IEA seryl-tRNA aminoacylation
GO:0070062 IEA extracellular vesicular exosome
GO:0097056 IEA selenocysteinyl-tRNA(Sec) biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008237 sars seryl-tRNA synthetase protein_coding Danio_rerio
ENSG00000031698 SARS seryl-tRNA synthetase protein_coding Homo_sapiens

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