C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: seryl-aminoacyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102625 Sars-002 ENSMUSG00000068739 10090 - 3:108426612-108445169 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102625
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102625 8.160±0.90 27.423±2.27 20.619±0.26 62.905±46.32 17.569±5.30 20.628±1.28 8.134±3.23 22.024±0.73 16.797±6.69 17.846±1.72 25.492±2.81 25.379±18.70 77.528±35.65 6.891±6.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442
CIL_00098X CIL_00098X_0002 VISTA 3:108109603-108712500

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004828 IEA serine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006434 IEA seryl-tRNA aminoacylation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000003296 sars-001 protein_coding Danio_rerio 0 516
ENST00000234677 SARS-001 protein_coding Homo_sapiens 0 1688
ENST00000369923 SARS-004 protein_coding Homo_sapiens 0 2117
ENST00000468588 SARS-006 processed_transcript Homo_sapiens 0 370
ENST00000471705 SARS-005 processed_transcript Homo_sapiens 0 497
ENST00000477544 SARS-003 processed_transcript Homo_sapiens 0 616
ENST00000482384 SARS-002 processed_transcript Homo_sapiens 0 224

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