C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: seryl-aminoacyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090553 Sars-001 ENSMUSG00000068739 10090 - 3:108424865-108445198 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000090553
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000090553 6.170±0.18 3.079±0.17 4.088±1.10 7.378±1.46 3.310±0.73 10.933±0.35 3.386±1.02 6.846±1.27 9.120±3.46 1.880±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442
CIL_00098X CIL_00098X_0002 VISTA 3:108109603-108712500

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004828 IEA serine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006434 IEA seryl-tRNA aminoacylation
GO:0097056 IEA selenocysteinyl-tRNA(Sec) biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000003296 sars-001 protein_coding Danio_rerio 0 630
ENST00000234677 SARS-001 protein_coding Homo_sapiens 0 2054
ENST00000369923 SARS-004 protein_coding Homo_sapiens 0 1688
ENST00000468588 SARS-006 processed_transcript Homo_sapiens 0 370
ENST00000471705 SARS-005 processed_transcript Homo_sapiens 0 497
ENST00000477544 SARS-003 processed_transcript Homo_sapiens 0 616
ENST00000482384 SARS-002 processed_transcript Homo_sapiens 0 224

Loading