C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: seryl-aminoacyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153499 Sars-003 ENSMUSG00000068739 10090 - 3:108429350-108445209 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000153499
Transcript ID Ovary Placenta Testis
ENSMUST00000153499 34.465±0.00 48.781±12.11 24.565±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442
CIL_00098X CIL_00098X_0002 VISTA 3:108109603-108712500

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004828 IEA serine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006434 IEA seryl-tRNA aminoacylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000234677 SARS-001 protein_coding Homo_sapiens 0 616
ENST00000369923 SARS-004 protein_coding Homo_sapiens 0 616
ENST00000477544 SARS-003 processed_transcript Homo_sapiens 0 767
ENST00000482384 SARS-002 processed_transcript Homo_sapiens 0 224

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