C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glutamate receptor, ionotropic, delta 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000071424 Grid2 10090 + 6:63255876-64668282 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000095852 Grid2-001 63256027-64668282 protein_coding
  ENSMUST00000159319 Grid2-003 63255876-63314071 processed_transcript
  ENSMUST00000159561 Grid2-002 63256006-64182477 protein_coding
  ENSMUST00000160408 Grid2-004 63256195-63504872 retained_intron
  ENSMUST00000161105 Grid2-005 63256826-64278792 retained_intron
  ENSMUST00000162968 Grid2-006 64076792-64094748 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095852ENSMUST00000159319ENSMUST00000159561ENSMUST00000160408ENSMUST00000161105ENSMUST00000162968
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095852 0.089±0.04 0.080±0.02 1.870±0.63 0.017±0.00 0.051±0.02 0.025±0.00 0.011±0.00 0.003±0.00 0.026±0.01 0.015±0.00 0.014±0.01 0.005±0.00 0.031±0.01
ENSMUST00000159319 N/A N/A N/A 0.053±0.03 0.036±0.02 N/A N/A N/A 0.012±0.00 N/A N/A N/A 0.024±0.00
ENSMUST00000159561 0.154±0.00 N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A 0.007±0.00 0.005±0.00 0.002±0.00 N/A
ENSMUST00000160408 N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A 0.082±0.00 N/A N/A N/A 0.030±0.01
ENSMUST00000161105 0.338±0.00 N/A N/A N/A N/A N/A 0.011±0.00 N/A 0.042±0.00 N/A N/A N/A N/A
ENSMUST00000162968 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.083±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RV CIL_0001RV_0003 CGP 6:61180324-64668282
CIL_0005BW CIL_0005BW_0003 CGP 6:63255876-64731233

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004970 IBA ionotropic glutamate receptor activity
GO:0005234 IBA extracellular-glutamate-gated ion channel activity
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0007157 IGI heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0008328 IDA ionotropic glutamate receptor complex
GO:0010975 IMP regulation of neuron projection development
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0021707 IGI cerebellar granule cell differentiation
GO:0030054 IEA cell junction
GO:0030165 IPI PDZ domain binding
GO:0034220 IBA ion transmembrane transport
GO:0034613 IDA cellular protein localization
GO:0035235 IBA ionotropic glutamate receptor signaling pathway
GO:0035249 IMP synaptic transmission, glutamatergic
GO:0043197 IDA dendritic spine
GO:0043523 IGI regulation of neuron apoptotic process
GO:0045202 IDA synapse
GO:0045211 IDA postsynaptic membrane
GO:0060079 IMP regulation of excitatory postsynaptic membrane potential
GO:0060134 IMP prepulse inhibition
GO:0097110 IPI scaffold protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055302 grid2 glutamate receptor, ionotropic, delta 2 protein_coding Danio_rerio
ENSG00000152208 GRID2 glutamate receptor, ionotropic, delta 2 protein_coding Homo_sapiens

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