C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005BW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000055302-ENSDARG00000055294 CGP 7955 8:29748731-30443657
GeneTranscriptPositionBiotype
ENSDARG00000055294 (atoh1a)
atonal homolog 1a 		ENSDART00000077642 (atoh1a-001) 30442028-30443657 protein_coding
ENSDARG00000055302 (grid2)
glutamate receptor, ionotropic, delta 2 		ENSDART00000077647 (grid2-201) 30115135-30435529 protein_coding
ENSDART00000127112 (grid2-202) 29830544-29830696 protein_coding
ENSDART00000141634 (grid2-001) 29748731-30435745 protein_coding
ENSDARG00000092755 (AL807792.1)
 ENSDART00000131878 (AL807792.1-201) 30442039-30442927 pseudogene
ENSDARG00000096836 (si:ch211-247l22.4)
si:ch211-247l22.4 		ENSDART00000154459 (si:ch211-247l22.4-001) 30429537-30483965 lincRNA
CIL_0005BW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000152208-ENSG00000172238 CGP 9606 4:92304399-93830964
GeneTranscriptPositionBiotype
ENSG00000152208 (GRID2)
glutamate receptor, ionotropic, delta 2 		ENST00000282020 (GRID2-001) 92304399-93774556 protein_coding
ENST00000502699 (GRID2-006) 92822949-93166161 nonsense_mediated_decay
ENST00000505687 (GRID2-003) 92304485-93217267 processed_transcript
ENST00000510992 (GRID2-002) 92304657-93772498 protein_coding
ENST00000512631 (GRID2-005) 93203949-93238421 protein_coding
ENST00000513976 (GRID2-007) 93238371-93306322 nonsense_mediated_decay
ENST00000515744 (GRID2-004) 92822949-93112247 processed_transcript
ENST00000611049 (GRID2-201) 93084986-93774553 protein_coding
ENSG00000172238 (ATOH1)
atonal homolog 1 (Drosophila) 		ENST00000306011 (ATOH1-001) 93828753-93830964 protein_coding
ENSG00000248627 (RP11-428L21.1)
 ENST00000502570 (RP11-428L21.1-001) 92833685-92838842 antisense
ENSG00000249239 (RP11-428L21.2)
 ENST00000510601 (RP11-428L21.2-001) 92821986-92822918 processed_pseudogene
ENSG00000250908 (RP11-703C10.1)
 ENST00000505498 (RP11-703C10.1-001) 93318623-93319786 antisense
ENSG00000251449 (MTND1P19)
MT-ND1 pseudogene 19 		ENST00000511780 (MTND1P19-001) 92702345-92702659 processed_pseudogene
CIL_0005BW_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000071424-ENSMUSG00000073043 CGP 10090 6:63255876-64731233
GeneTranscriptPositionBiotype
ENSMUSG00000071424 (Grid2)
glutamate receptor, ionotropic, delta 2 		ENSMUST00000095852 (Grid2-001) 63256027-64668282 protein_coding
ENSMUST00000159319 (Grid2-003) 63255876-63314071 processed_transcript
ENSMUST00000159561 (Grid2-002) 63256006-64182477 protein_coding
ENSMUST00000160408 (Grid2-004) 63256195-63504872 retained_intron
ENSMUST00000161105 (Grid2-005) 63256826-64278792 retained_intron
ENSMUST00000162968 (Grid2-006) 64076792-64094748 retained_intron
ENSMUSG00000073043 (Atoh1)
atonal homolog 1 (Drosophila) 		ENSMUST00000101351 (Atoh1-201) 64729146-64731233 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005BW_0001ENSDARG00000055294ENSDART00000077642ENSDARG00000055302ENSDART00000077647ENSDART00000127112ENSDART00000141634ENSDARG00000092755ENSDART00000131878ENSDARG00000096836ENSDART00000154459CIL_0005BW_0002ENSG00000152208ENST00000282020ENST00000502699ENST00000505687ENST00000510992ENST00000512631ENST00000513976ENST00000515744ENST00000611049ENSG00000172238ENST00000306011ENSG00000248627ENST00000502570ENSG00000249239ENST00000510601ENSG00000250908ENST00000505498ENSG00000251449ENST00000511780CIL_0005BW_0003ENSMUSG00000071424ENSMUST00000095852ENSMUST00000159319ENSMUST00000159561ENSMUST00000160408ENSMUST00000161105ENSMUST00000162968ENSMUSG00000073043ENSMUST00000101351
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005BW_0001ENSDARG00000055294ENSDART00000077642ENSDARG00000055302ENSDART00000077647ENSDART00000141634ENSDARG00000092755ENSDART00000131878ENSDARG00000096836ENSDART00000154459CIL_0005BW_0002ENSG00000152208ENST00000282020ENST00000502699ENST00000505687ENST00000510992ENST00000512631ENST00000611049ENSG00000172238ENST00000306011ENSG00000248627ENST00000502570ENSG00000249239ENST00000510601ENSG00000250908ENST00000505498ENSG00000251449ENST00000511780CIL_0005BW_0003ENSMUSG00000071424ENSMUST00000095852ENSMUST00000159319ENSMUST00000159561ENSMUST00000160408ENSMUST00000161105ENSMUST00000162968ENSMUSG00000073043ENSMUST00000101351
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000055294 ENSDART00000077642 N/A N/A N/A N/A N/A N/A 0.398±0.00 0.043±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000055302 ENSDART00000077647 N/A N/A N/A 5.673±0.00 N/A N/A 0.397±0.10 0.879±0.00 0.024±0.00 N/A 0.143±0.00 N/A N/A N/A
ENSDART00000127112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141634 N/A N/A N/A 4.333±0.00 N/A N/A N/A N/A N/A N/A 0.850±0.00 N/A N/A N/A
ENSDARG00000092755 ENSDART00000131878 N/A N/A N/A 0.103±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000096836 ENSDART00000154459 N/A N/A N/A 0.810±0.00 N/A N/A 0.241±0.06 0.340±0.06 N/A N/A 0.061±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000152208 ENST00000282020 N/A N/A N/A 0.552±0.00 N/A 0.061±0.00 0.011±0.00 N/A N/A N/A N/A 0.106±0.06 N/A N/A
ENST00000502699 N/A N/A N/A N/A N/A N/A 0.159±0.00 N/A 0.269±0.00 N/A N/A N/A N/A N/A
ENST00000505687 N/A N/A N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000510992 N/A N/A N/A 0.719±0.34 0.030±0.00 0.027±0.00 0.039±0.00 0.029±0.00 0.214±0.00 0.135±0.00 N/A N/A 0.036±0.02 1.472±0.37
ENST00000512631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.903±5.11
ENST00000513976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611049 0.007±0.00 N/A N/A N/A N/A N/A N/A 0.021±0.00 0.068±0.00 0.032±0.00 N/A 0.235±0.19 0.015±0.00 0.424±0.00
ENSG00000172238 ENST00000306011 N/A N/A N/A N/A 3.124±0.00 3.132±0.55 N/A 0.084±0.00 N/A N/A N/A 0.267±0.21 N/A 0.016±0.01
ENSG00000248627 ENST00000502570 N/A N/A N/A 0.423±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.351±0.00
ENSG00000249239 ENST00000510601 0.064±0.00 0.067±0.00 N/A 0.541±0.00 0.017±0.00 N/A N/A 0.033±0.00 N/A 0.015±0.00 0.014±0.00 0.018±0.00 N/A 1.308±0.87
ENSG00000250908 ENST00000505498 N/A N/A N/A 0.172±0.00 N/A N/A 0.059±0.00 N/A N/A N/A N/A 0.214±0.00 N/A 0.213±0.14
ENSG00000251449 ENST00000511780 N/A N/A N/A 0.851±0.00 N/A N/A 0.241±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000071424 ENSMUST00000095852 N/A 0.089±0.04 0.080±0.02 1.870±0.63 0.017±0.00 0.051±0.02 0.025±0.00 0.011±0.00 0.003±0.00 0.026±0.01 0.015±0.00 0.014±0.01 0.005±0.00 0.031±0.01
ENSMUST00000159319 N/A N/A N/A N/A 0.053±0.03 0.036±0.02 N/A N/A N/A 0.012±0.00 N/A N/A N/A 0.024±0.00
ENSMUST00000159561 N/A 0.154±0.00 N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A 0.007±0.00 0.005±0.00 0.002±0.00 N/A
ENSMUST00000160408 N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A 0.082±0.00 N/A N/A N/A 0.030±0.01
ENSMUST00000161105 N/A 0.338±0.00 N/A N/A N/A N/A N/A 0.011±0.00 N/A 0.042±0.00 N/A N/A N/A N/A
ENSMUST00000162968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.083±0.00 N/A N/A N/A
ENSMUSG00000073043 ENSMUST00000101351 0.060±0.03 0.032±0.01 0.008±0.00 1.197±0.69 0.067±0.02 56.530±4.74 N/A 0.013±0.00 0.016±0.00 0.109±0.10 N/A 0.094±0.00 0.027±0.02 0.014±0.00

Loading