C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, ionotropic, delta 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095852 Grid2-001 ENSMUSG00000071424 10090 + 6:63256027-64668282 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095852
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095852 0.089±0.04 0.080±0.02 1.870±0.63 0.017±0.00 0.051±0.02 0.025±0.00 0.011±0.00 0.003±0.00 0.026±0.01 0.015±0.00 0.014±0.01 0.005±0.00 0.031±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RV CIL_0001RV_0003 CGP 6:61180324-64668282
CIL_0005BW CIL_0005BW_0003 CGP 6:63255876-64731233

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004970 IBA ionotropic glutamate receptor activity
GO:0005234 IBA extracellular-glutamate-gated ion channel activity
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0007157 IGI heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0008328 IDA ionotropic glutamate receptor complex
GO:0010975 IMP regulation of neuron projection development
GO:0016020 IDA membrane
GO:0021707 IGI cerebellar granule cell differentiation
GO:0030054 IEA cell junction
GO:0030165 IPI PDZ domain binding
GO:0034220 IBA ion transmembrane transport
GO:0034613 IDA cellular protein localization
GO:0035235 IBA ionotropic glutamate receptor signaling pathway
GO:0035249 IMP synaptic transmission, glutamatergic
GO:0043197 IDA dendritic spine
GO:0043523 IGI regulation of neuron apoptotic process
GO:0045202 IDA synapse
GO:0045211 IDA postsynaptic membrane
GO:0060079 IMP regulation of excitatory postsynaptic membrane potential
GO:0060134 IMP prepulse inhibition
GO:0097110 IPI scaffold protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282020 GRID2-001 protein_coding Homo_sapiens 0 5594
ENST00000502699 GRID2-006 nonsense_mediated_decay Homo_sapiens 0 654
ENST00000505687 GRID2-003 processed_transcript Homo_sapiens 0 1301
ENST00000510992 GRID2-002 protein_coding Homo_sapiens 0 3230
ENST00000512631 GRID2-005 protein_coding Homo_sapiens 0 599
ENST00000513976 GRID2-007 nonsense_mediated_decay Homo_sapiens 1.99993e-41 172
ENST00000515744 GRID2-004 processed_transcript Homo_sapiens 0 656
ENST00000611049 GRID2-201 protein_coding Homo_sapiens 0 5212

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