C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PEST proteolytic signal containing nuclear protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122253 Pcnp-005 ENSMUSG00000071533 10090 - 16:56018120-56029696 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000122253
Transcript ID Testis
ENSMUST00000122253 14.132±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016567 IEA protein ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265260 PCNP-001 protein_coding Homo_sapiens 0 645
ENST00000393579 PCNPP3-001 processed_pseudogene Homo_sapiens 0 387
ENST00000452246 PCNPP5-001 processed_pseudogene Homo_sapiens 0 381
ENST00000460231 PCNP-002 nonsense_mediated_decay Homo_sapiens 0 427
ENST00000465366 PCNP-009 retained_intron Homo_sapiens 4e-16 90
ENST00000469941 PCNP-003 protein_coding Homo_sapiens 0 200
ENST00000470490 PCNP-007 processed_transcript Homo_sapiens 0 523
ENST00000486406 PCNP-006 processed_transcript Homo_sapiens 4e-16 90
ENST00000498274 PCNP-005 nonsense_mediated_decay Homo_sapiens 0 523
ENST00000552501 PCNPP1-001 processed_pseudogene Homo_sapiens 0 399

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