C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PEST proteolytic signal containing nuclear protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125040 Pcnp-007 ENSMUSG00000071533 10090 - 16:56015506-56029696 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000125040
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000125040 13.290±2.20 21.068±0.89 16.523±2.61 9.826±1.37 10.023±1.84 14.508±3.91 8.306±1.41 18.431±4.43 14.767±2.60 15.793±12.49 14.197±7.90 6.232±3.74

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265260 PCNP-001 protein_coding Homo_sapiens 0 861
ENST00000393579 PCNPP3-001 processed_pseudogene Homo_sapiens 0 257
ENST00000452246 PCNPP5-001 processed_pseudogene Homo_sapiens 0 592
ENST00000460231 PCNP-002 nonsense_mediated_decay Homo_sapiens 0 832
ENST00000465366 PCNP-009 retained_intron Homo_sapiens 0 374
ENST00000469941 PCNP-003 protein_coding Homo_sapiens 0 861
ENST00000470490 PCNP-007 processed_transcript Homo_sapiens 0 625
ENST00000486406 PCNP-006 processed_transcript Homo_sapiens 0 390
ENST00000498274 PCNP-005 nonsense_mediated_decay Homo_sapiens 0 617
ENST00000552501 PCNPP1-001 processed_pseudogene Homo_sapiens 0 440

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