C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PEST proteolytic signal containing nuclear protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114444 Pcnp-001 ENSMUSG00000071533 10090 - 16:56015506-56029739 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000114444
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000114444 10.304±0.00 22.866±1.52 15.792±0.03 5.450±0.00 9.197±0.00 4.463±0.00 9.623±0.00 22.808±12.80 9.567±0.32 7.472±0.00 14.497±10.62

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0007049 IEA cell cycle
GO:0016567 ISS protein ubiquitination
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265260 PCNP-001 protein_coding Homo_sapiens 0 961
ENST00000393579 PCNPP3-001 processed_pseudogene Homo_sapiens 0 387
ENST00000452246 PCNPP5-001 processed_pseudogene Homo_sapiens 0 532
ENST00000460231 PCNP-002 nonsense_mediated_decay Homo_sapiens 0 832
ENST00000465366 PCNP-009 retained_intron Homo_sapiens 0 374
ENST00000469941 PCNP-003 protein_coding Homo_sapiens 0 861
ENST00000470490 PCNP-007 processed_transcript Homo_sapiens 0 721
ENST00000486406 PCNP-006 processed_transcript Homo_sapiens 0 390
ENST00000498274 PCNP-005 nonsense_mediated_decay Homo_sapiens 0 713
ENST00000552501 PCNPP1-001 processed_pseudogene Homo_sapiens 0 551

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