C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sorting nexin 29
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000071669 Snx29 10090 + 16:11322908-11755472 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000096273 Snx29-001 11405648-11755472 protein_coding
  ENSMUST00000115814 Snx29-201 11322972-11403836 protein_coding
  ENSMUST00000122168 Snx29-002 11406657-11661555 protein_coding
  ENSMUST00000134941 Snx29-003 11447308-11661496 retained_intron
  ENSMUST00000150993 Snx29-005 11420708-11679349 protein_coding
  ENSMUST00000151478 Snx29-004 11445185-11631727 retained_intron
  ENSMUST00000180792 Snx29-006 11322908-11755472 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000096273ENSMUST00000122168ENSMUST00000134941ENSMUST00000150993ENSMUST00000151478ENSMUST00000180792
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000096273 N/A N/A N/A N/A N/A N/A 0.930±0.00 N/A N/A N/A N/A 1.980±0.56
ENSMUST00000122168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.714±0.00
ENSMUST00000134941 N/A N/A N/A N/A 1.010±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150993 N/A N/A 0.991±0.00 N/A N/A 0.221±0.00 N/A N/A 0.136±0.05 N/A N/A N/A
ENSMUST00000151478 N/A N/A N/A 4.222±0.00 N/A N/A N/A N/A 1.805±0.00 5.208±0.00 3.597±2.15 N/A
ENSMUST00000180792 1.150±0.00 1.319±0.14 3.997±0.00 N/A 2.422±0.58 N/A 0.669±0.20 2.823±0.00 0.583±0.26 1.852±0.00 1.382±0.71 0.854±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LT CIL_0001LT_0002 CGP 16:11313812-11755472
CIL_0007DY CIL_0007DY_0002 CGP 16:11322908-11909445

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003777 IEA microtubule motor activity
GO:0005871 IEA kinesin complex
GO:0007018 IEA microtubule-based movement
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0035091 IEA phosphatidylinositol binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077317 snx29 sorting nexin 29 protein_coding Danio_rerio
ENSG00000048471 SNX29 sorting nexin 29 protein_coding Homo_sapiens

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