C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sorting nexin 29
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151478 Snx29-004 ENSMUSG00000071669 10090 + 16:11445185-11631727 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryPlacentaENSMUST00000151478
Transcript ID Brain Muscle Ovary Placenta
ENSMUST00000151478 4.222±0.00 1.805±0.00 5.208±0.00 3.597±2.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LT CIL_0001LT_0002 CGP 16:11313812-11755472
CIL_0007DY CIL_0007DY_0002 CGP 16:11322908-11909445

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000114248 snx29-001 protein_coding Danio_rerio 8e-17 92
ENST00000564791 SNX29-009 protein_coding Homo_sapiens 0 433
ENST00000566228 SNX29-005 protein_coding Homo_sapiens 0 545

Loading