C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: arrestin domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000074794 Arrdc3 10090 + 13:80883384-80896035 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000099356 Arrdc3-001 80883410-80896029 protein_coding
  ENSMUST00000159090 Arrdc3-004 80883384-80889643 retained_intron
  ENSMUST00000159690 Arrdc3-002 80883410-80896035 nonsense_mediated_decay
  ENSMUST00000159856 Arrdc3-005 80890104-80891252 retained_intron
  ENSMUST00000161441 Arrdc3-003 80886095-80894320 protein_coding
  ENSMUST00000162904 Arrdc3-006 80890518-80891642 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099356ENSMUST00000159690ENSMUST00000161441ENSMUST00000162904
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099356 6.953±1.70 11.724±3.26 7.212±0.24 9.249±4.13 4.845±1.35 4.152±0.90 5.227±1.11 8.295±2.00 14.804±9.46 15.965±1.58 7.715±3.86 8.802±5.69 23.336±6.76 7.598±1.66
ENSMUST00000159690 1.254±0.00 N/A 1.147±0.10 3.075±0.30 1.647±0.45 1.434±0.31 1.296±0.00 1.316±0.00 4.782±2.52 2.745±0.00 0.414±0.00 2.311±0.91 3.053±0.00 4.347±0.00
ENSMUST00000161441 4.052±1.63 6.225±1.82 N/A N/A 4.149±2.35 N/A N/A 3.117±0.52 N/A N/A N/A 7.547±2.25 N/A 11.832±1.76
ENSMUST00000162904 8.950±1.17 9.854±1.15 N/A N/A 10.063±4.04 9.998±2.33 8.962±1.39 13.838±1.85 16.937±0.00 23.254±3.48 N/A 17.665±5.28 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SQ CIL_0008SQ_0002 VISTA 13:80322907-80923514
CIL_0008R6 CIL_0008R6_0002 VISTA 13:80456720-81058239
CIL_0007Q4 CIL_0007Q4_0002 VISTA 13:80488037-81088037

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001659 IMP temperature homeostasis
GO:0005515 IEA protein binding
GO:0005768 IEA endosome
GO:0005886 IEA plasma membrane
GO:0031651 IMP negative regulation of heat generation
GO:0031699 IEA beta-3 adrenergic receptor binding
GO:0043588 IMP skin development
GO:0044252 IMP negative regulation of multicellular organismal metabolic process
GO:0051443 IEA positive regulation of ubiquitin-protein transferase activity
GO:0060613 IMP fat pad development
GO:0071879 IMP positive regulation of adrenergic receptor signaling pathway
GO:0090327 IMP negative regulation of locomotion involved in locomotory behavior

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052690 arrdc3a arrestin domain containing 3a protein_coding Danio_rerio
ENSG00000113369 ARRDC3 arrestin domain containing 3 protein_coding Homo_sapiens

Loading