C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arrestin domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099356 Arrdc3-001 ENSMUSG00000074794 10090 + 13:80883410-80896029 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099356
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099356 6.953±1.70 11.724±3.26 7.212±0.24 9.249±4.13 4.845±1.35 4.152±0.90 5.227±1.11 8.295±2.00 14.804±9.46 15.965±1.58 7.715±3.86 8.802±5.69 23.336±6.76 7.598±1.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SQ CIL_0008SQ_0002 VISTA 13:80322907-80923514
CIL_0008R6 CIL_0008R6_0002 VISTA 13:80456720-81058239
CIL_0007Q4 CIL_0007Q4_0002 VISTA 13:80488037-81088037

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001659 IMP temperature homeostasis
GO:0005515 IEA protein binding
GO:0005768 IEA endosome
GO:0005886 IEA plasma membrane
GO:0031651 IMP negative regulation of heat generation
GO:0031699 IEA beta-3 adrenergic receptor binding
GO:0043588 IMP skin development
GO:0044252 IMP negative regulation of multicellular organismal metabolic process
GO:0051443 IEA positive regulation of ubiquitin-protein transferase activity
GO:0060613 IMP fat pad development
GO:0071879 IMP positive regulation of adrenergic receptor signaling pathway
GO:0090327 IMP negative regulation of locomotion involved in locomotory behavior

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265138 ARRDC3-001 protein_coding Homo_sapiens 0 2558
ENST00000503192 ARRDC3-008 processed_transcript Homo_sapiens 0 536
ENST00000505631 ARRDC3-004 retained_intron Homo_sapiens 0 405
ENST00000507075 ARRDC3-002 retained_intron Homo_sapiens 0 503
ENST00000508948 ARRDC3-006 processed_transcript Homo_sapiens 0 551
ENST00000511391 ARRDC3-005 retained_intron Homo_sapiens 0 749
ENST00000514284 ARRDC3-010 processed_transcript Homo_sapiens 0 427

Loading