C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arrestin domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159690 Arrdc3-002 ENSMUSG00000074794 10090 + 13:80883410-80896035 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000159690
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000159690 1.254±0.00 1.147±0.10 3.075±0.30 1.647±0.45 1.434±0.31 1.296±0.00 1.316±0.00 4.782±2.52 2.745±0.00 0.414±0.00 2.311±0.91 3.053±0.00 4.347±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SQ CIL_0008SQ_0002 VISTA 13:80322907-80923514
CIL_0008R6 CIL_0008R6_0002 VISTA 13:80456720-81058239
CIL_0007Q4 CIL_0007Q4_0002 VISTA 13:80488037-81088037

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001659 IMP temperature homeostasis
GO:0031651 IMP negative regulation of heat generation
GO:0043588 IMP skin development
GO:0044252 IMP negative regulation of multicellular organismal metabolic process
GO:0060613 IMP fat pad development
GO:0071879 IMP positive regulation of adrenergic receptor signaling pathway
GO:0090327 IMP negative regulation of locomotion involved in locomotory behavior

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265138 ARRDC3-001 protein_coding Homo_sapiens 0 1812
ENST00000503192 ARRDC3-008 processed_transcript Homo_sapiens 0 536
ENST00000505631 ARRDC3-004 retained_intron Homo_sapiens 0 405
ENST00000507075 ARRDC3-002 retained_intron Homo_sapiens 0 503
ENST00000508948 ARRDC3-006 processed_transcript Homo_sapiens 0 551
ENST00000511391 ARRDC3-005 retained_intron Homo_sapiens 0 758
ENST00000514284 ARRDC3-010 processed_transcript Homo_sapiens 0 427

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