Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	galactose-3-O-sulfotransferase 4
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSMUSG00000075593	Gal3st4	10090	-	5:138264921-138272840	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSMUST00000100530		Gal3st4-003	138264925-138272754	protein_coding
	ENSMUST00000161279		Gal3st4-001	138264938-138272801	protein_coding
	ENSMUST00000161647		Gal3st4-002	138264921-138272840	protein_coding
	ENSMUST00000161665		Gal3st4-005	138270993-138272749	protein_coding
	ENSMUST00000162557		Gal3st4-004	138264938-138272801	processed_transcript
Mus musculus EnsemblGRCm38 Genome Exciting message Genes Gene structures from Ensembl Connecting Transcripts Structures from Ensembl Connecting Powered by Dalliance 0.11.11

Expression Patterns

Transcript ID	Brain	Muscle	Placenta	Testis
ENSMUST00000100530	N/A	0.240±0.00	N/A	N/A
ENSMUST00000161647	N/A	0.537±0.00	N/A	N/A
ENSMUST00000162557	2.963±0.00	0.743±0.00	3.008±0.00	1.303±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0008QI	CIL_0008QI_0002	VISTA	5:137705744-138314172
CIL_0005BN	CIL_0005BN_0003	CGP	5:138259658-138272840
CIL_0005CG	CIL_0005CG_0002	CGP	5:138264921-138280005

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0001733	IEA	galactosylceramide sulfotransferase activity
GO:0005794	IEA	Golgi apparatus
GO:0009058	IEA	biosynthetic process
GO:0016020	IEA	membrane
GO:0016021	IEA	integral component of membrane
GO:0050694	IEA	galactose 3-O-sulfotransferase activity
GO:0070062	IEA	extracellular vesicular exosome

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000079712	GAL3ST4	galactose-3-O-sulfotransferase 4	protein_coding	Danio_rerio
ENSG00000197093	GAL3ST4	galactose-3-O-sulfotransferase 4	protein_coding	Homo_sapiens

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