C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: galactose-3-O-sulfotransferase 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197093 GAL3ST4 9606 - 7:100159244-100168750 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000360039 GAL3ST4-001 100159245-100168750 protein_coding
  ENST00000411994 GAL3ST4-004 100159816-100167230 protein_coding
  ENST00000413800 GAL3ST4-003 100159244-100167284 protein_coding
  ENST00000423751 GAL3ST4-002 100159646-100168613 protein_coding
  ENST00000460995 GAL3ST4-006 100166599-100168135 processed_transcript
  ENST00000482469 GAL3ST4-007 100166533-100168069 processed_transcript
  ENST00000495882 GAL3ST4-005 100159244-100168112 retained_intron
  ENST00000498000 GAL3ST4-008 100160729-100168142 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000360039ENST00000411994ENST00000413800ENST00000423751ENST00000460995ENST00000495882ENST00000498000
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000360039 1.075±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.376±0.00 3.039±0.00 0.904±0.00 1.522±0.00
ENST00000411994 N/A N/A N/A N/A 1.371±0.00 N/A 0.060±0.00 0.913±0.00 0.119±0.05 0.768±0.00 0.132±0.00 2.538±1.81 N/A 0.649±0.00
ENST00000413800 0.963±0.00 1.220±0.00 N/A 0.622±0.00 1.249±0.68 1.841±0.00 0.379±0.00 0.273±0.00 N/A 0.896±0.00 N/A 2.911±1.31 3.479±1.22 0.765±0.00
ENST00000423751 N/A N/A N/A 0.360±0.00 0.306±0.00 0.802±0.00 0.215±0.00 N/A 0.332±0.25 N/A N/A 2.342±0.44 2.056±0.00 N/A
ENST00000460995 N/A N/A 1.927±0.00 0.612±0.00 N/A 1.145±0.00 N/A N/A 0.876±0.00 N/A N/A N/A N/A N/A
ENST00000495882 N/A 0.262±0.00 N/A N/A N/A N/A 0.069±0.00 0.110±0.00 N/A 0.143±0.07 0.085±0.00 0.787±0.00 N/A 0.813±0.00
ENST00000498000 N/A N/A N/A 0.992±0.00 N/A N/A N/A N/A N/A 1.646±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0001 VISTA 7:99696610-100298804
CIL_0005BN CIL_0005BN_0002 CGP 7:100154420-100168750
CIL_0005CG CIL_0005CG_0001 CGP 7:100159244-100177372

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001733 IEA galactosylceramide sulfotransferase activity
GO:0005794 IEA Golgi apparatus
GO:0006790 NAS sulfur compound metabolic process
GO:0007267 NAS cell-cell signaling
GO:0009058 IEA biosynthetic process
GO:0009100 NAS glycoprotein metabolic process
GO:0009311 NAS oligosaccharide metabolic process
GO:0016020 IDA membrane
GO:0016021 NAS:IEA integral component of membrane
GO:0030166 NAS proteoglycan biosynthetic process
GO:0050656 NAS 3'-phosphoadenosine 5'-phosphosulfate binding
GO:0050694 IDA galactose 3-O-sulfotransferase activity
GO:0050698 NAS proteoglycan sulfotransferase activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079712 GAL3ST4 galactose-3-O-sulfotransferase 4 protein_coding Danio_rerio
ENSMUSG00000075593 Gal3st4 galactose-3-O-sulfotransferase 4 protein_coding Mus_musculus

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