C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: expressed sequence AU022252
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000078584 AU022252 10090 - 4:119203570-119232712 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046260 AU022252-004 119226382-119232678 processed_transcript
  ENSMUST00000132778 AU022252-001 119203570-119232708 processed_transcript
  ENSMUST00000141112 AU022252-002 119219842-119232712 protein_coding
  ENSMUST00000144309 AU022252-003 119226472-119232685 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000132778ENSMUST00000141112ENSMUST00000144309
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000132778 N/A N/A 0.726±0.00 N/A N/A N/A N/A N/A 0.642±0.00 N/A N/A 1.214±0.00 N/A N/A
ENSMUST00000141112 3.053±0.66 3.547±0.81 2.121±0.50 4.503±1.05 2.162±0.77 2.848±0.39 2.144±0.50 3.218±0.40 6.078±4.33 2.754±0.07 3.968±1.20 2.842±0.80 1.670±0.11 3.418±0.31
ENSMUST00000144309 N/A N/A N/A N/A N/A 5.197±0.18 N/A N/A N/A N/A N/A 9.275±0.00 13.692±5.86 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008N2 CIL_0008N2_0002 VISTA 4:118719151-119320076
CIL_0008PM CIL_0008PM_0002 VISTA 4:118938785-119540197

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071211 C11H1orf50 chromosome 1 open reading frame 50 protein_coding Danio_rerio
ENSG00000164008 C1orf50 chromosome 1 open reading frame 50 protein_coding Homo_sapiens

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