C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: expressed sequence AU022252
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132778 AU022252-001 ENSMUSG00000078584 10090 - 4:119203570-119232708 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverOvaryENSMUST00000132778
Transcript ID Bladder Liver Ovary
ENSMUST00000132778 0.726±0.00 0.642±0.00 1.214±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008N2 CIL_0008N2_0002 VISTA 4:118719151-119320076
CIL_0008PM CIL_0008PM_0002 VISTA 4:118938785-119540197

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372525 C1orf50-001 protein_coding Homo_sapiens 0 675
ENST00000464081 C1orf50-004 nonsense_mediated_decay Homo_sapiens 0 351
ENST00000468913 C1orf50-007 processed_transcript Homo_sapiens 0 475
ENST00000494155 C1orf50-003 retained_intron Homo_sapiens 1e-38 163
ENST00000603943 C1orf50-008 nonsense_mediated_decay Homo_sapiens 0 619

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