C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: expressed sequence AU022252
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144309 AU022252-003 ENSMUSG00000078584 10090 - 4:119226472-119232685 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonOvaryPlacentaENSMUST00000144309
Transcript ID Colon Ovary Placenta
ENSMUST00000144309 5.197±0.18 9.275±0.00 13.692±5.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008N2 CIL_0008N2_0002 VISTA 4:118719151-119320076
CIL_0008PM CIL_0008PM_0002 VISTA 4:118938785-119540197

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372525 C1orf50-001 protein_coding Homo_sapiens 0 525
ENST00000464081 C1orf50-004 nonsense_mediated_decay Homo_sapiens 0 204
ENST00000468913 C1orf50-007 processed_transcript Homo_sapiens 0 326
ENST00000494155 C1orf50-003 retained_intron Homo_sapiens 1e-38 163
ENST00000603943 C1orf50-008 nonsense_mediated_decay Homo_sapiens 0 446

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