C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SEC61, gamma subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000078974 Sec61g 10090 - 11:16500530-16508484 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000109641 Sec61g-002 16501651-16508069 protein_coding
  ENSMUST00000109642 Sec61g-005 16501387-16508166 protein_coding
  ENSMUST00000109643 Sec61g-001 16500530-16508484 protein_coding
  ENSMUST00000131439 Sec61g-004 16501643-16505044 retained_intron
  ENSMUST00000138695 Sec61g-003 16506092-16508132 retained_intron
  ENSMUST00000166950 Sec61g-201 16501638-16508484 protein_coding
  ENSMUST00000178855 Sec61g-202 16501638-16508484 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109641ENSMUST00000109643ENSMUST00000138695ENSMUST00000166950ENSMUST00000178855
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109641 N/A 1.483±0.23 N/A N/A N/A N/A N/A N/A 5.337±0.78 N/A 11.392±0.00 102.105±38.84 94.492±42.65 N/A
ENSMUST00000109643 1.147±0.25 N/A N/A 2.265±0.00 N/A N/A N/A N/A N/A N/A N/A 0.486±0.00 N/A N/A
ENSMUST00000138695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.715±16.83 59.782±7.71 N/A
ENSMUST00000166950 11.837±1.91 2.715±0.56 59.648±11.49 42.423±19.95 12.059±9.27 6.582±0.96 14.804±0.77 13.596±3.75 69.398±66.45 9.603±1.44 48.945±5.58 14.169±13.76 80.027±34.52 22.169±2.77
ENSMUST00000178855 N/A N/A N/A N/A N/A N/A N/A N/A 12.104±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LU CIL_0006LU_0002 CGP 11:16257724-16508484
CIL_000647 CIL_000647_0002 CGP 11:16500530-16918158

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0006605 IEA protein targeting
GO:0015450 IEA P-P-bond-hydrolysis-driven protein transmembrane transporter activity
GO:0016021 IEA integral component of membrane
GO:0071806 IEA protein transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018637 sec61g Sec61 gamma subunit protein_coding Danio_rerio
ENSG00000132432 SEC61G Sec61 gamma subunit protein_coding Homo_sapiens

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