C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000647_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132432-ENSG00000146648 CGP 9606 7:54752250-55256620
GeneTranscriptPositionBiotype
ENSG00000132432 (SEC61G)
Sec61 gamma subunit 		ENST00000352861 (SEC61G-201) 54752251-54759246 protein_coding
ENST00000395535 (SEC61G-002) 54752250-54759246 protein_coding
ENST00000415949 (SEC61G-001) 54752253-54759974 protein_coding
ENST00000450622 (SEC61G-005) 54752257-54759182 protein_coding
ENST00000460484 (SEC61G-003) 54754792-54759198 retained_intron
ENST00000461536 (SEC61G-006) 54755503-54759215 retained_intron
ENST00000480303 (SEC61G-004) 54755405-54759241 retained_intron
ENSG00000146648 (EGFR)
epidermal growth factor receptor 		ENST00000275493 (EGFR-001) 55019101-55211628 protein_coding
ENST00000342916 (EGFR-003) 55019032-55168635 protein_coding
ENST00000344576 (EGFR-002) 55019033-55171045 protein_coding
ENST00000420316 (EGFR-005) 55019034-55156951 protein_coding
ENST00000442591 (EGFR-201) 55019118-55256620 protein_coding
ENST00000450046 (EGFR-009) 55109723-55146724 protein_coding
ENST00000454757 (EGFR-202) 55019032-55207337 protein_coding
ENST00000455089 (EGFR-004) 55019021-55203076 protein_coding
ENST00000459688 (EGFR-007) 55019131-55044049 processed_transcript
ENST00000463948 (EGFR-008) 55019151-55119401 processed_transcript
ENST00000485503 (EGFR-010) 55192811-55200802 retained_intron
ENSG00000218586 (RP4-791C19.1)
 ENST00000407916 (RP4-791C19.1-001) 54933699-54938184 processed_pseudogene
ENSG00000234707 (RP11-745C15.2)
 ENST00000439413 (RP11-745C15.2-001) 54759425-54804928 antisense
ENSG00000237210 (RP11-339F13.2)
 ENST00000425993 (RP11-339F13.2-001) 55244247-55245681 processed_pseudogene
CIL_000647_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000078974-ENSMUSG00000020122 CGP 10090 11:16500530-16918158
GeneTranscriptPositionBiotype
ENSMUSG00000020122 (Egfr)
epidermal growth factor receptor 		ENSMUST00000020329 (Egfr-001) 16752211-16918158 protein_coding
ENSMUST00000102884 (Egfr-002) 16752203-16887923 protein_coding
ENSMUST00000125984 (Egfr-003) 16878150-16884357 protein_coding
ENSMUST00000138518 (Egfr-004) 16905185-16910809 processed_transcript
ENSMUST00000139722 (Egfr-005) 16752230-16793744 processed_transcript
ENSMUSG00000048149 (Gm12663)
 ENSMUST00000052877 (Gm12663-201) 16634962-16636140 pseudogene
ENSMUSG00000076337 (Gm24714)
predicted gene, 24714 		ENSMUST00000102382 (Gm24714-201) 16645438-16645538 miRNA
ENSMUSG00000078974 (Sec61g)
SEC61, gamma subunit 		ENSMUST00000109641 (Sec61g-002) 16501651-16508069 protein_coding
ENSMUST00000109642 (Sec61g-005) 16501387-16508166 protein_coding
ENSMUST00000109643 (Sec61g-001) 16500530-16508484 protein_coding
ENSMUST00000131439 (Sec61g-004) 16501643-16505044 retained_intron
ENSMUST00000138695 (Sec61g-003) 16506092-16508132 retained_intron
ENSMUST00000166950 (Sec61g-201) 16501638-16508484 protein_coding
ENSMUST00000178855 (Sec61g-202) 16501638-16508484 protein_coding
ENSMUSG00000081332 (Gm12664)
predicted gene 12664 		ENSMUST00000118306 (Gm12664-001) 16643009-16643921 processed_pseudogene
ENSMUSG00000084347 (Akt2-ps)
thymoma viral proto-oncogene 2, pseudogene 		ENSMUST00000120718 (Akt2-ps-001) 16514533-16515981 processed_pseudogene
ENSMUSG00000085091 (Egfros)
epidermal growth factor receptor, opposite strand 		ENSMUST00000150329 (Egfros-001) 16815431-16830702 antisense
ENSMUSG00000101316 (RP23-478B14.1)
predicted gene 12663 		ENSMUST00000118481 (RP23-478B14.1-001) 16635109-16636066 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000647_0001ENSG00000132432ENST00000352861ENST00000395535ENST00000415949ENST00000450622ENST00000460484ENST00000461536ENST00000480303ENSG00000146648ENST00000275493ENST00000342916ENST00000344576ENST00000420316ENST00000442591ENST00000450046ENST00000454757ENST00000455089ENST00000459688ENST00000463948ENST00000485503ENSG00000218586ENST00000407916ENSG00000234707ENST00000439413ENSG00000237210ENST00000425993CIL_000647_0002ENSMUSG00000020122ENSMUST00000020329ENSMUST00000102884ENSMUST00000125984ENSMUST00000138518ENSMUST00000139722ENSMUSG00000048149ENSMUST00000052877ENSMUSG00000076337ENSMUST00000102382ENSMUSG00000078974ENSMUST00000109641ENSMUST00000109642ENSMUST00000109643ENSMUST00000131439ENSMUST00000138695ENSMUST00000166950ENSMUST00000178855ENSMUSG00000081332ENSMUST00000118306ENSMUSG00000084347ENSMUST00000120718ENSMUSG00000085091ENSMUST00000150329ENSMUSG00000101316ENSMUST00000118481
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000647_0001ENSG00000132432ENST00000352861ENST00000395535ENST00000450622ENST00000460484ENSG00000146648ENST00000275493ENST00000342916ENST00000454757ENSG00000218586ENST00000407916ENSG00000234707ENST00000439413ENSG00000237210ENST00000425993CIL_000647_0002ENSMUSG00000020122ENSMUST00000020329ENSMUST00000102884ENSMUST00000139722ENSMUSG00000048149ENSMUST00000052877ENSMUSG00000076337ENSMUST00000102382ENSMUSG00000078974ENSMUST00000109641ENSMUST00000109643ENSMUST00000138695ENSMUST00000166950ENSMUST00000178855ENSMUSG00000081332ENSMUST00000118306ENSMUSG00000084347ENSMUST00000120718ENSMUSG00000085091ENSMUST00000150329ENSMUSG00000101316ENSMUST00000118481
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132432 ENST00000352861 55.127±0.00 58.074±0.00 5.145±0.00 38.582±21.24 35.856±12.81 35.439±16.85 25.134±2.36 36.201±7.17 28.807±6.76 23.894±2.61 21.048±6.02 99.410±60.15 65.273±42.48 109.187±11.94
ENST00000395535 N/A N/A N/A N/A N/A N/A 3.741±0.00 N/A N/A 10.043±0.00 N/A 20.727±0.00 7.194±0.00 17.480±0.00
ENST00000415949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450622 N/A N/A N/A 12.711±0.00 N/A 37.843±0.00 N/A 23.011±0.00 32.419±0.00 13.295±0.00 7.901±0.00 41.204±0.00 21.132±6.86 19.214±0.00
ENST00000460484 N/A N/A 0.221±0.00 N/A N/A 1.093±0.00 N/A N/A N/A 1.902±0.00 N/A N/A N/A N/A
ENST00000461536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000146648 ENST00000275493 11.327±0.00 4.313±0.00 3.456±0.00 3.376±1.02 9.046±2.98 6.443±0.04 2.534±1.20 9.665±2.06 8.835±0.75 6.174±1.83 1.289±0.09 3.793±2.31 37.074±5.44 7.314±6.27
ENST00000342916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.644±0.00 N/A N/A N/A
ENST00000344576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454757 N/A N/A N/A N/A N/A N/A N/A 2.919±0.00 N/A 2.073±0.00 N/A N/A N/A N/A
ENST00000455089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000218586 ENST00000407916 N/A 0.002±0.00 N/A 0.004±0.00 N/A N/A 0.006±0.00 0.094±0.00 0.045±0.00 0.002±0.00 N/A 0.012±0.00 N/A 0.003±0.00
ENSG00000234707 ENST00000439413 N/A N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A N/A N/A 0.069±0.00 0.145±0.00 0.642±0.00
ENSG00000237210 ENST00000425993 N/A 0.044±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 0.032±0.00 0.153±0.14
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020122 ENSMUST00000020329 6.977±2.70 0.803±0.12 3.524±0.25 1.030±0.26 8.054±0.86 4.744±0.42 0.787±0.04 4.476±0.61 16.824±17.48 3.034±0.35 0.598±0.10 8.595±2.42 2.342±1.43 0.299±0.12
ENSMUST00000102884 4.741±0.06 0.834±0.29 N/A N/A 5.233±0.62 5.358±0.47 0.640±0.05 4.690±0.86 23.583±14.36 2.568±0.23 0.460±0.00 3.932±0.86 1.841±1.19 0.333±0.11
ENSMUST00000125984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139722 N/A 5.513±0.47 N/A N/A 45.772±1.44 21.638±3.82 N/A N/A N/A 10.381±0.70 N/A 35.614±8.39 N/A N/A
ENSMUSG00000048149 ENSMUST00000052877 1.195±0.29 0.517±0.35 0.115±0.03 0.304±0.10 1.020±0.26 0.727±0.29 0.784±0.27 1.034±0.23 0.728±0.31 1.103±0.31 0.075±0.00 1.166±0.73 2.600±1.12 0.927±0.57
ENSMUSG00000076337 ENSMUST00000102382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 203.825±0.00 N/A
ENSMUSG00000078974 ENSMUST00000109641 N/A 1.483±0.23 N/A N/A N/A N/A N/A N/A 5.337±0.78 N/A 11.392±0.00 102.105±38.84 94.492±42.65 N/A
ENSMUST00000109642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109643 1.147±0.25 N/A N/A 2.265±0.00 N/A N/A N/A N/A N/A N/A N/A 0.486±0.00 N/A N/A
ENSMUST00000131439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.715±16.83 59.782±7.71 N/A
ENSMUST00000166950 11.837±1.91 2.715±0.56 59.648±11.49 42.423±19.95 12.059±9.27 6.582±0.96 14.804±0.77 13.596±3.75 69.398±66.45 9.603±1.44 48.945±5.58 14.169±13.76 80.027±34.52 22.169±2.77
ENSMUST00000178855 N/A N/A N/A N/A N/A N/A N/A N/A 12.104±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000081332 ENSMUST00000118306 N/A N/A 0.009±0.00 N/A N/A N/A N/A N/A 0.095±0.00 N/A N/A N/A 0.013±0.00 N/A
ENSMUSG00000084347 ENSMUST00000120718 3.065±1.28 1.520±0.09 0.353±0.19 0.544±0.20 1.940±0.65 0.741±0.16 1.206±0.20 0.458±0.11 0.448±0.27 0.872±0.12 0.102±0.06 2.236±1.38 0.185±0.12 0.439±0.18
ENSMUSG00000085091 ENSMUST00000150329 0.080±0.06 0.074±0.04 0.231±0.05 0.003±0.00 0.144±0.06 0.058±0.01 0.022±0.01 0.117±0.09 0.164±0.24 0.052±0.02 0.007±0.00 0.148±0.17 0.150±0.14 0.041±0.02
ENSMUSG00000101316 ENSMUST00000118481 N/A 0.219±0.00 0.102±0.09 0.127±0.01 N/A N/A 0.206±0.00 N/A 0.286±0.15 0.248±0.00 0.028±0.01 0.295±0.02 0.596±0.75 N/A

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